Gene Information

Name : LVIS_0269 (LVIS_0269)
Accession : YP_794466.1
Strain : Lactobacillus brevis ATCC 367
Genome accession: NC_008497
Putative virulence/resistance : Resistance
Product : cation transport ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 286092 - 288164 bp
Length : 2073 bp
Strand : -
Note : -

DNA sequence :
ATGAAAGAACACGAAATGATGACCCACGATCACATGGACCAAATGGATATGGCTCATGGCGATCACATGAATATGAACGA
TATGGATATGGACATGGGCGATGGCCATATGATGCACATGGGCAACTTAAAGCGTAAGTTCTGGGTTTCCCTGATTCTGA
CCATCCCCATTATTCTCATGTCACCAATGATGGGTGTCACCCTGCCCTTCCAGTTAACCTTTCCCGGTAGTGATTGGGTC
GTCGCCATCTTAGGCACGATTCTCTTCATTTACGGTGGTGCCCCCTTCTTCAGCGGTGCCAAGGCCGAACTCCAAATGAA
ACAACCGGCAATGATGACGCTCATCACGATGGGCGTTGGTGTGGCTTACATCTACAGTATTTATGCCGTCATCGCTAACG
ACTTATTCCATGTCACCCCGATGGTCAACAATTTCTTCTGGGAACTTTCCACTTTAATTGTCATCATGCTATTAGGACAC
TGGATTGAAATGAACACCGTCATGAATGCTGGGTCAGCCGTGGATGCCTTAGGCAAGCTACTCCCACAAACTGCCCACGT
CGTTGATGACGCTGGCACCACCCACGACGTTTCCCTAAATGACCTACAAGTTGGCCAGATAGTGGTTGTTCGTGCTGGTG
AGCAAATTCCCGCGGATGCGACGATTGTAACTGGGACCTCCGCAGTTAATGAATCCCTAGTCACTGGTGAAGCTGCTGCC
GTCAAAAAGGTTACGGGCGACCAAGTCATCGGCGGTTCCGTGAATGGCACCGGAACATTTACGGCTAAAGTCACCGGAAC
TGGTGATTCCGGTTATCTCGCTCAAGTCATGGACTTGATCCAAAATGCCAAGAATGCAAAATCAACCTCAGAAAATTTGG
CTGATCGCGTGGCTGGCTGGTTATTCTACGCTGCTTTATTCGTTGGTATTCTGGCTTTCCTCATTTGGTTAACGGTGGCC
AACCTAGCCGTGGCACTTCCCGTAGCGGTGGCCGTCTTCGTCATCGCCTGCCCGCACGCATTGGGCTTGGCTGTCCCACT
AGTTGTCGCACGGAGTACAGCACTAGCCGCTCAAAATGGCTTACTCATCCGTAATCGCAATGCCATGGAAGATGTCAAAC
ACTTAAAATTTGCGCTGATGGATAAAACGGGAACTTTGACTATGGGGCATTTTCAAGTGAACCATTTGATTAGCTTAGAC
CAAGACTACAGTGAAGAAACCATTTTACGCTTACTAGCTAGCCTGGAAAGCGGCTCTAGTCATCCACTAGCAACCGGGAT
TCTTAGCGCTGCTAAGGCACAACAAATTACCTATACAGCTGCTACTGACACGCATCAAGAAACTGGGATGGGCCAGTTTG
GTACCATCGATGACATCACTTATGGTGTCGTTGCCGTTTCCTATTTGGAGCAACACCACTTAACTTACGATCAAGCCCAA
TTCAAGACCTTAGCCGCTGAAGGCAATTCACTCAGCTATCTCGTCACAGGTGACCGGGTCTTGGGGTTAGTCGCTGAAGG
TGATCAGATCAAACCAAACGCCCAGCACCTCGTCAGTGAATTAAAGCGCCAAGGGATTACCCCCGTCATGCTGACGGGTG
ATAATCAAGAAACGGCGAATAAGGTCGCTCACGCTGTCGGGATTGAGGATGTACAAGCTCGCTTATTGCCAGAAGACAAG
GAACGTCTCGTTCAACAGTACCAAGCCTCTGGTAAAGTCCTCTTTATCGGCGATGGGGTCAACGATGCCCCAAGCTTGGC
CCGAGCAGATATCGGGATGGCAATTGGCTCTGGTACCGATGTCGCGATTGAATCGGCAGACATTATCTTAGTCGCCAGTG
ATCCAGCCGACGTCATTCAATTCCTAGACTTAGCGCGCGCGACGACACGGAAGATGACCGAAAACCTCTGGTGGGGAGCT
GGCTACAACTTAATCGCGATTCCACTGGCAGCTGGGATCTTAGCCCCCATTGGTTTCATGCTTGATCCCATGGTTGGTGC
CGTCATCATGTCACTTAGCACCGTGATTGTGGCAATTAACGCGATGACCTTAAAACTCAAACCTGTCAAATAA

Protein sequence :
MKEHEMMTHDHMDQMDMAHGDHMNMNDMDMDMGDGHMMHMGNLKRKFWVSLILTIPIILMSPMMGVTLPFQLTFPGSDWV
VAILGTILFIYGGAPFFSGAKAELQMKQPAMMTLITMGVGVAYIYSIYAVIANDLFHVTPMVNNFFWELSTLIVIMLLGH
WIEMNTVMNAGSAVDALGKLLPQTAHVVDDAGTTHDVSLNDLQVGQIVVVRAGEQIPADATIVTGTSAVNESLVTGEAAA
VKKVTGDQVIGGSVNGTGTFTAKVTGTGDSGYLAQVMDLIQNAKNAKSTSENLADRVAGWLFYAALFVGILAFLIWLTVA
NLAVALPVAVAVFVIACPHALGLAVPLVVARSTALAAQNGLLIRNRNAMEDVKHLKFALMDKTGTLTMGHFQVNHLISLD
QDYSEETILRLLASLESGSSHPLATGILSAAKAQQITYTAATDTHQETGMGQFGTIDDITYGVVAVSYLEQHHLTYDQAQ
FKTLAAEGNSLSYLVTGDRVLGLVAEGDQIKPNAQHLVSELKRQGITPVMLTGDNQETANKVAHAVGIEDVQARLLPEDK
ERLVQQYQASGKVLFIGDGVNDAPSLARADIGMAIGSGTDVAIESADIILVASDPADVIQFLDLARATTRKMTENLWWGA
GYNLIAIPLAAGILAPIGFMLDPMVGAVIMSLSTVIVAINAMTLKLKPVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 1e-128 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LVIS_0269 YP_794466.1 cation transport ATPase BAC0079 Protein 1e-163 56
LVIS_0269 YP_794466.1 cation transport ATPase BAC0383 Protein 4e-133 49
LVIS_0269 YP_794466.1 cation transport ATPase BAC0629 Protein 4e-113 45