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Name : LVIS_0253 (LVIS_0253) Accession : YP_794450.1 Strain : Lactobacillus brevis ATCC 367 Genome accession: NC_008497 Putative virulence/resistance : Unknown Product : succinyl-diaminopimelate desuccinylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0624 EC number : - Position : 268045 - 269280 bp Length : 1236 bp Strand : - Note : dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is simi DNA sequence : GTGGATGAAGTTGTGCAAGCACTCAGTGACGTCATCAAACTCAACACAGTTAATGGTAATGAAAAGGTCGTTGCCGACTA TCTGGCTGATCTATTAGCCAAACATGGTATCGATAGTAAGGCTGTCGCCTATGAACCTGATCGGGTCAGTCTTGTAGCCG AGATTGGCGATGGTCATGGTCCCGTTGTGGGATTTGACGGCCATGAAGATATCGTTGCCTTGGGGGATGCCGCCAAGTGG GATGCAGATGCCTTGTCTGCCAAAATCGCTGACGGCAAGATGTTTGGTCGTGGCACCACAGATATGAAGTCCGGCTTAAT GGCTGGCGTCTTTGCGATGATTCACTTAAAAGAAAATAATGTTCCCCTACACGGCACATTACGCTTAATGGCAACCGTTG GTGAAGAATATGGTCAATTCGGCGCCCGGCAGTTAGCTGAGGCCGGTTATGCTAAGAACCTAGACACCCTCATTGTTGGT GAACCCAGCGGTGTCGTTAAACAAGCCGTGGCCACCCCACAAATCCAACAGATGTTGCAAATTAACCAGGACAGCGCCAA TAAGTTAATGGCCGCCAATCAAACGACTGAACAACACTTCATTGAGTTAGCGCACAAGGGCTCTTTGACGTATACGGTGA GTGCTCAAGGCGTGGCGGCACATAGTTCAATGCCAGAAATTGGTAAAAATGCCATTGATTCACTGCTAACCTTCTACCAA AAACAACAGGCCTACTTCGCGACTATCACCGATAAGAAGAATCCGGTCTTAGGGGCCACGGTTCCCGTTGTCACTCTGAT TCAGGGTGGCGAGCAGATTAACACGGTTCCAGCCAGTGCCTCGATTTCGGTTAAAATCAGAACCATTCCGGAAGTGCCGA ACACCAAGTTAGCCGCTGATATCCAGCAGCTCATCGACGAGCTAAATGCTAACGGGGAACAACTTTCCTTAGATATTCAC AGTAACCTGTATCCCGTGCACACTGCCGATGATGCACCAGTGGTTAAAGCAGCTAAAGAATGCGGTGAGGCTGACTTACA ACAAGCCTTACCACTTATCGGCGTTCCCGGTGGAACTGACGCATCGTCCTTCGTTGCAGTTAATCCAGATATCGACGTTG TGGTCTTTGGCCCGGGAAACATCACAGCTCACCAAGTGAACGAATACGTTGACCTAGACATGTATCACCGTTTCATCACC ATCTATGAAAAGATGATTACACGTTTGTTGGCTTAA Protein sequence : MDEVVQALSDVIKLNTVNGNEKVVADYLADLLAKHGIDSKAVAYEPDRVSLVAEIGDGHGPVVGFDGHEDIVALGDAAKW DADALSAKIADGKMFGRGTTDMKSGLMAGVFAMIHLKENNVPLHGTLRLMATVGEEYGQFGARQLAEAGYAKNLDTLIVG EPSGVVKQAVATPQIQQMLQINQDSANKLMAANQTTEQHFIELAHKGSLTYTVSAQGVAAHSSMPEIGKNAIDSLLTFYQ KQQAYFATITDKKNPVLGATVPVVTLIQGGEQINTVPASASISVKIRTIPEVPNTKLAADIQQLIDELNANGEQLSLDIH SNLYPVHTADDAPVVKAAKECGEADLQQALPLIGVPGGTDASSFVAVNPDIDVVVFGPGNITAHQVNEYVDLDMYHRFIT IYEKMITRLLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dapE | CAA07459.1 | succinyl-diaminopimelate desuccinylase | Not tested | Internalin | Protein | 2e-70 | 41 |
