Gene Information

Name : araD (LVIS_1741)
Accession : YP_795839.1
Strain : Lactobacillus brevis ATCC 367
Genome accession: NC_008497
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 4-epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0235
EC number : 5.1.3.4
Position : 1693226 - 1693954 bp
Length : 729 bp
Strand : -
Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source

DNA sequence :
ATGTTAGAAGATTTAAAGCAAGAAGTCTACGACGCCAACATGCAGTTGCCTGAATTAGGATTGGTTACCTTTACTTGGGG
TAACGTTTCCGGTATTGATCGGGACAAAGGTCTGTTTGTCATCAAACCTTCTGGGGTTGATTACAATGACTTGAAGCCCA
GCGACATGGTTGTTGTTAACTTAAAGGGTGAAGTTGTTGAAGGAGATATGAATCCTTCCAGTGACACCCCAACGCATACA
GTACTTTACAATGAATTCCCTAATATTGGGGGAATTGTTCATACGCATTCACCTTGGGCAGTGTCATTTGCCGCTGCTAA
GATGGATATTCCCGCAATGAACACGACGCATGCGGACACATTCTATGGTGATGTACCAGCTGCTGATGCCTTGACTAAGG
AAGAAATTGAAGAAGATTACGAAGGCAACACGGGTAAGACGATCGTGAAGACCTTCAAGGAACGCGGCATTGATTACGAA
GCCGTTCCCGCTTCTTTGGTTAGTCAACACGGTCCCTTCGCTTGGGGGCCAACTCCAGCCAAAGCAGTTTACAACGCCAA
GGTTTTGGAAGTGGTTGCCGAAGAAGACTATCACACCGCTCAAATGACGCGTGCTAATCGGGAATTGCCACAGTATCTGT
TGGACAAGCATTATCTGCGTAAGCATGGGGCCAACGCTTATTATGGTCAAAATAATGCCCATTCCCAAGATCACGCGGCC
CGTCAATAA

Protein sequence :
MLEDLKQEVYDANMQLPELGLVTFTWGNVSGIDRDKGLFVIKPSGVDYNDLKPSDMVVVNLKGEVVEGDMNPSSDTPTHT
VLYNEFPNIGGIVHTHSPWAVSFAAAKMDIPAMNTTHADTFYGDVPAADALTKEEIEEDYEGNTGKTIVKTFKERGIDYE
AVPASLVSQHGPFAWGPTPAKAVYNAKVLEVVAEEDYHTAQMTRANRELPQYLLDKHYLRKHGANAYYGQNNAHSQDHAA
RQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 2e-57 56