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Name : LVIS_1710 (LVIS_1710) Accession : YP_795808.1 Strain : Lactobacillus brevis ATCC 367 Genome accession: NC_008497 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1665748 - 1667019 bp Length : 1272 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTAGATTTAAAGTTGATTCGCCAAGAACCAGACTTCATCAAAGAAAAGTTGGCAACTCGAGGCGTTGACCCAGCTGA TATTGATGCACTATTGGAACTTGATGCCAAACGTCGGGAACTAATTGTTAAGAGTGAAACGATGAAAGCCCAACGAAACA CGGTGTCTGATGAAATTTCACAATTGAAGCGGAATAAAGAAGATGCTGACGACAAGATTAAGGAAATGCGTCAGGTGAGT GCTGATATCAAAGATATTGATGCGCAATTGGATACATTAAAGGATCAAGTCCAAGATGCTGCCGCGCATTTACCTAATAT TCCCAACGATAATGTTCCAGTTGGATTAACTGAGGATGGGAGTGTTGAACTCCGCCAATGGGGCGAGAAGCCAAATATGG ACTTCACGCCTAAAGCACACTACGAAATTGGGGAAGATCTTGGCATCTTAGACTTTGAAGCTGGCGCTAAAGTTTCGGGT AGTCGGTATCTGTATTATCTGGGTGCCGGTGCGCGGTTGGAACGGGCCGTGTACAACTTTTTCTTGGATGAGAATACCAA GGCTGGATTTAAGGAAGTCCTGCCACCTTATATCGTGAATGACGATTCGATGTATGGTACGGGCCAATTTCCTAAGTTCA AGGAAGATGTTTACCAATTAAAGGATGAAGCCATGACCTTGATTCCAACGGCCGAAGTCCCCTTAGTGAACTACTATCGT GACGAAGTTATTCCTGAAGAAGAACTGCCAGTTTGGTTTACGGCCTTGACCCCAGCTTTCCGGTCTGAAGCCGGTAGTGC CGGTCGAGATACGCGCGGACTAATTCGGCTGCACCAATTCAATAAGGTTGAGATGGTGAAGTTCTGTAAACCTGAAAATT CGTGGGCTGAGTTGGAGGCCTTAACCAAGCATGCTGAGAGCCTCTTACAGAAGTTAGGCTTGGCTTACCATGTTATTACC TTGACGACTAGTGATATGAGCTTTACCGCGGCGATGACGCACGATCTGGAAGTCTGGTTCCCTGAACAACAGACTTATCG TGAAATTTCAAGTTGTTCGAACACCACGGACTTCCAAGCACGGCGCGCCCACATTCAATATCGTGATGAGAATGGTAAAT TACAATACGTGCATGCGTTGAACGGTTCCGGTTTGGCGGTTGGCCGGGCAGTTGCTGCGATTTTGGAAAATTATCAAAAT GCTGATGGTTCCGTCACTATTCCGGATGTTTTAGTGCCTTATATGGGTGGCTTAACTAAGATCACCAAGTAA Protein sequence : MLDLKLIRQEPDFIKEKLATRGVDPADIDALLELDAKRRELIVKSETMKAQRNTVSDEISQLKRNKEDADDKIKEMRQVS ADIKDIDAQLDTLKDQVQDAAAHLPNIPNDNVPVGLTEDGSVELRQWGEKPNMDFTPKAHYEIGEDLGILDFEAGAKVSG SRYLYYLGAGARLERAVYNFFLDENTKAGFKEVLPPYIVNDDSMYGTGQFPKFKEDVYQLKDEAMTLIPTAEVPLVNYYR DEVIPEEELPVWFTALTPAFRSEAGSAGRDTRGLIRLHQFNKVEMVKFCKPENSWAELEALTKHAESLLQKLGLAYHVIT LTTSDMSFTAAMTHDLEVWFPEQQTYREISSCSNTTDFQARRAHIQYRDENGKLQYVHALNGSGLAVGRAVAAILENYQN ADGSVTIPDVLVPYMGGLTKITK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-135 | 65 |
