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Name : LVIS_1700 (LVIS_1700) Accession : YP_795806.1 Strain : Lactobacillus brevis ATCC 367 Genome accession: NC_008497 Putative virulence/resistance : Virulence Product : ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1661455 - 1663941 bp Length : 2487 bp Strand : - Note : - DNA sequence : ATGGACAATTTATTTACCCCAAGTGCTAAGAGCGTGCTCGTTTTGGCACAGGAACAAGCGAAGTATTTTAAGCACCAAGC AGTTGGTACAGAACATTTGCTACTCGCACTGACAATTGAAAAGAATGGCATTGCTAATAAGGTGTTGCAACAGTTCTCGG TTAGTGAGGACGACGTGCGTGAAGAGATTGAACGTTTCACGGGCTACGGCACATTAGCCAACACAGATAAGGATAGTTAT TTACCCTACTCGCCTAAGGCTAAGACATTGTTGGCTTTAGCTGGTGATGAAGCTAAACGCTTAGGTGCTGCTAAGATTGG TACGGAACACCTATTATTGGCGTTATTGAGTGACGAAACCATTTTGTCTTCTCGTATTTTGAAGAATTTAAACGTTGAAT TACCAGATGCACGCAAGGTCGTGTTGCGGAAGCTCGGGATTGCGGATACGCCCAAGCGGCGTAATGACAGCCGGACGCGG CGAGCACCCCAAGGTGGCACCCCAACGCTGGACTCATTAGCCCGAAATCTAACGGACGCTGCTAAAGAGGGGCGGATGGA TCCAACTGTCGGCCGCGATAAAGAAGTTAAACGGGTGATTCAAATTCTGAGTCGACGGACGAAGAACAACCCTGTCTTAA TTGGCGAACCCGGTGTTGGGAAAACGGCGATTGCGGAAGGCTTAGCCCAACGTATCGTAGCTGGCGATGTGCCAGAAGAT ATGCAACAGAAGCGATTAATGATGCTAGACATGGGATCATTGGTGGCCGGGACGAAATATCGTGGTGAATTTGAAGATCG ATTAAAGAAGGTCATCGAAGAAATTTATAACGATGGGCAAGTTATTCTCTTTATTGATGAATTACACACTTTGATTGGTG CTGGTGGTGCTGAAGGTGCCATTGATGCGTCGAACATTTTAAAGCCAGCCTTGGCCCGTGGTGAACTACAAACCATTGGG GCAACGACACTGGATGAATATCAAAAGTATATTGAATCCGATGCGGCTTTGGAACGTCGATTTGCAACGGTGCAAGTCAA TGAACCAACACCTAGTGAAGCCCTACAGATCTTGAAAGGGTTGCGTTCGCGTTACGAAGATCATCACCATGTGAATATTA CGGACACGGCTCTGGAACAAGCGGTGAAGCTTTCGGGTCGCTACATCAGTGATCGTTTCTTGCCAGATAAGGCGATTGAT TTGATGGACGAAGCCTCTGCCAAGGTTCGGATTGATCAGATGGATCGACCAACTGCAGCCTCTAAGCAGGTTCAAGAGTT AAAAGACCTGGCGGCGGAAAAGGAAACCGCTATTGAGGCGCAGGACTTTGAACGAGCGGCTAAACTCCGAGCGGAAGAAA TGAAGCTTCGAGAAAAAGTGGCTGCGCGTGAGGCTAAGGCTAAAGCAGCGAGTGAGGAAGAAACTCGGCATTATGCCTTA GACGTGACGGGTGAAGACGTGGCCGATGTGGTTGCTGAGTGGACGGGAGTTCCCGTAACACAGTTGAAGCAGACGGATGC CGATCGATTGGTTAACCTGGAAAAGATCTTGCATCAGCGGGTCATTGGTCAATCCGAGGCTGTTTCGGCAGTGTCTCGCG CAATTCGCCGAGCACGGTCAGGCTTAAAGGATCCAAATCGGCCAATTGGGTCGTTCATGTTCTTAGGACCAACCGGTGTT GGGAAGACCGAGCTTGCCAAGGCGTTAGCTGAAGCCATGTTTGGGTCCGAAGATAATATGATCCGGGTAGACATGAGTGA GTATATGGAAAAGTACTCAACTAGTCGGCTGATTGGTTCAGCTCCCGGTTACGTGGGGTATGACGAAGGCGGTCAGTTAA CCGAAAAGGTTCGGCAAAAGCCATATTCTGTGGTTCTCTTTGATGAAGTTGAAAAGGCCCATCCAGATGTCTTTAACATT TTATTGCAAGTCTTGGACGATGGCTATTTAACCGATTCTAAGGGTCGTAAGGTTGATTTCCGAAATACCATCCTGATTAT GACCTCTAACTTGGGTGCAACTAAGTTACGGGATGAAAAGACGGTTGGATTTGGTGCTGAAGACATGGCGAATGATTATC GGGCGATGGCTGGAACTATCCGGGAAACGTTGAAGCAATCATTCCGGCCGGAATTCCTAAACCGGATTGATGAAACGGTT ATCTTCCATTCCTTACAAAAGGATGAACTTCACGCAATTGTGAAGCTGATGGCACAACAGATTGTGGCTCGGGTTGCAGA ACAAAACATCAAGCTGAAGATTACACCAGCAGCGATTGATGTGGTAGCCAAAGCTGGCTTTGATCCTGAATATGGTGCGC GGCCAATTCGGCGGGCATTACAAACGCAGGTTGAAGATAAGCTGAGTGAAGCCTTACTTAATGGTGAGGTTAAAACGGGT GATCAAGTCACCATTGGGGCAACCAAAGGTGAAGTGACGGTTAATGTTAAAACAACTGATGGTCCTAAAGCCGTTATTAA TGCTTAA Protein sequence : MDNLFTPSAKSVLVLAQEQAKYFKHQAVGTEHLLLALTIEKNGIANKVLQQFSVSEDDVREEIERFTGYGTLANTDKDSY LPYSPKAKTLLALAGDEAKRLGAAKIGTEHLLLALLSDETILSSRILKNLNVELPDARKVVLRKLGIADTPKRRNDSRTR RAPQGGTPTLDSLARNLTDAAKEGRMDPTVGRDKEVKRVIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVAGDVPED MQQKRLMMLDMGSLVAGTKYRGEFEDRLKKVIEEIYNDGQVILFIDELHTLIGAGGAEGAIDASNILKPALARGELQTIG ATTLDEYQKYIESDAALERRFATVQVNEPTPSEALQILKGLRSRYEDHHHVNITDTALEQAVKLSGRYISDRFLPDKAID LMDEASAKVRIDQMDRPTAASKQVQELKDLAAEKETAIEAQDFERAAKLRAEEMKLREKVAAREAKAKAASEEETRHYAL DVTGEDVADVVAEWTGVPVTQLKQTDADRLVNLEKILHQRVIGQSEAVSAVSRAIRRARSGLKDPNRPIGSFMFLGPTGV GKTELAKALAEAMFGSEDNMIRVDMSEYMEKYSTSRLIGSAPGYVGYDEGGQLTEKVRQKPYSVVLFDEVEKAHPDVFNI LLQVLDDGYLTDSKGRKVDFRNTILIMTSNLGATKLRDEKTVGFGAEDMANDYRAMAGTIRETLKQSFRPEFLNRIDETV IFHSLQKDELHAIVKLMAQQIVARVAEQNIKLKITPAAIDVVAKAGFDPEYGARPIRRALQTQVEDKLSEALLNGEVKTG DQVTIGATKGEVTVNVKTTDGPKAVINA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LVIS_1700 | YP_795806.1 | ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones | VFG0079 | Protein | 0.0 | 60 |
| LVIS_1700 | YP_795806.1 | ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones | VFG0080 | Protein | 8e-146 | 49 |
| LVIS_1700 | YP_795806.1 | ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones | VFG2084 | Protein | 4e-92 | 42 |
