|
Name : LVIS_1407 (LVIS_1407) Accession : YP_795536.1 Strain : Lactobacillus brevis ATCC 367 Genome accession: NC_008497 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : 1.8.1.4 Position : 1375730 - 1377157 bp Length : 1428 bp Strand : - Note : E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide DNA sequence : ATGGCAGATGTTGAAAAAAAGGACACCGTCATCATCGGTGCCGGACCCGGCGGTTACGTTGCCGCCATTCGGGCTTCTGA ATTGGGGCAAAAAGTAACCTTAATTGAAAAGTCCGATACCCTTGGTGGTGTCTGCTTGAACGTTGGTTGTGTACCGTCTA AAGCCTTAATTCAGGCCGGTCACCGGTTGGAACAGGCCAAGGATGGGTCCACTTATGGAATTTCTACAGACTCAGCCACA ATTGATTTTAAGAAGACCCAAGAATGGAAGCAAAAGAAGGTCGTTGATCGTATGACCAGCGGCGTTAAGATGCTGATGAA GAAGCACCATGTTGACGTGGTCAGTGGTGAAGCTGTTTTCCTCAGTGACACACAGTTACGGGTAATGCCGACAGGCGAAA AGCAATTCATGTCAACTGACACGGGTCAGACTTTCGAGTTCAATAATATTATTATTGCCTCTGGGTCACACCCAATTCAA ATTCCTGGCTTTAAGTTTGATGGTCGGGTTGTGGATTCAACTGGTGGCCTGAATCTGCCAGAGATTCCTAAAGAATTTGT TGTCATTGGTGGTGGCTACGTCGGTACGGAATTAGCCGGAGCCTATGCAAGTTTAGGTGCTCATGTTACCATTCTTGAAG GAAGTCCATCGATTCTGCCTAACTTTGAAAAGGACATGGTTTCTGTTGTTCTGAAGAAGTTGAAGAAAAAAGGTGTGGAC GTTATTACTAACGCAATGGCCAAGAGTTCTAGCCAAGATGATCAAAGCGTTAGTGTTACCTATGCGGTTGATGGCAAGGA ATCGACAATTAAAGCCGATTACTGCATGGTTACTGTTGGTCGGCGGCCAAATACCGATGACTTAGGGCTTGAATACACCA AGGTTGAGTTAAACGATCATGGTCAAATCAAGGTCGATAACCAAGGCCGGACAGCTTCCGAACACATCTGGGCTGTTGGT GATGTGGTTCCTGGTGCTGCATTGGCTCATAAAGCCTTTGCCGAAGCCAAGACGGCAGCTGGTGCGATTGCTGGTAAGAA GACGGCTAACGACTGGTTAAGTGTTCCAGCAGTTTGCTTCTCTGATCCAGAAATTGCGACCGTTGGTTACAGTGAATCAG CTGCAAAGGATAAAGGAATCAAAGTGAAGACGGCTAAGTTCCCATTTGCTGGGAATGCCCGGGCTGTATCTTTGGATTCC CCAGATGGTTTTGTTCGATTCATCTATACAGATGATGACAACCAAAACATCGTAGGTGCTGAAGCAGTTGGTCCTGAAGC CAGCACGATGGCTGGTGAATTATCAGTGATCGTTAATGATGGCTTGAATGTTGAGGATGTGGCGTTGACTATTCACCCAC ACCCAACGTTAAATGAACCAATTCAAGAAACGGCTGATATTGCTTTGGGCTTCCCAACGCATATCTAA Protein sequence : MADVEKKDTVIIGAGPGGYVAAIRASELGQKVTLIEKSDTLGGVCLNVGCVPSKALIQAGHRLEQAKDGSTYGISTDSAT IDFKKTQEWKQKKVVDRMTSGVKMLMKKHHVDVVSGEAVFLSDTQLRVMPTGEKQFMSTDTGQTFEFNNIIIASGSHPIQ IPGFKFDGRVVDSTGGLNLPEIPKEFVVIGGGYVGTELAGAYASLGAHVTILEGSPSILPNFEKDMVSVVLKKLKKKGVD VITNAMAKSSSQDDQSVSVTYAVDGKESTIKADYCMVTVGRRPNTDDLGLEYTKVELNDHGQIKVDNQGRTASEHIWAVG DVVPGAALAHKAFAEAKTAAGAIAGKKTANDWLSVPAVCFSDPEIATVGYSESAAKDKGIKVKTAKFPFAGNARAVSLDS PDGFVRFIYTDDDNQNIVGAEAVGPEASTMAGELSVIVNDGLNVEDVALTIHPHPTLNEPIQETADIALGFPTHI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 3e-80 | 43 |
