Gene Information

Name : ribD (PA14_11400)
Accession : YP_789063.1
Strain : Pseudomonas aeruginosa UCBPP-PA14
Genome accession: NC_008463
Putative virulence/resistance : Unknown
Product : riboflavin-specific deaminase/reductase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 988435 - 989556 bp
Length : 1122 bp
Strand : +
Note : -

DNA sequence :
ATGAACGCCGCCGACCCGCTGTACATGGCCCGCGCCCTGGAACTGGCGCGCCAGGGGCTGTACTCCACCCATCCGAATCC
GCGCGTCGGCTGCGTGCTGGTCAAGGACGGCCAGGTGGTCGGCGAGGGCTGGCACGTCCGCGCCGGCGAGCCGCACGCCG
AGGTCCATGCCCTGCGCCAGGCCGGCGAGAATGCACGCGGCGCCACCGCCTACGTGACCCTCGAGCCCTGCAGCCACTTC
GGCCGCACCCCGCCGTGCGCCGACGCGCTGGTGGGCGCCGGGGTGGCGCGGGTGGTCGCGGCGATGCAGGATCCCAACCC
CGAGGTCGCCGGTCGCGGCCTGCTGCGTCTGATGCAGGCCGGCATCGCGGTGCAGAGCGGGGTCCTCGAAGCCGAGGCGC
GGGAACTCAACATCGGTTTCATCAAGCGCATGGAACATGGCCTGCCGTTCGTCCGGGTCAAGCTGGCGATGAGCCTGGAC
GGGCGCACCGCCATGGCCAGCGGGGAAAGCCAGTGGATCACCGGGCCCTCTGCGCGTTCGGCGGTGCAGCGCTTGCGCGC
TCGCTCCAGCGTGGTGTTGTCCGGCGCCGATACGCTGCTGGCGGACGATGCGCGGCTCAACGTACGCCCCGACGAACTGG
GCCTGAACGCCGAGCTTACCGCGCTCGCCGCGGCTCGCCAGCCGTTGCGGGTGCTGGTCGACGGGCGCCTGCGGGTGCCG
CTGGAGTCGGCGTTCTACCAGGCCGGTCCGGCACTGGTGGCGACCTGCGCCGCCGCCTCGGCGCGCGAACGCTTCCAGGA
CGCCGGTCACGAACTGCTGGCGCTGCCCTCCGCCGAGGGGCATGTCGACCTGCACAAGTTGCTCGTGGAACTGGCGGCGC
GCGGCGCCAACGAAGTGCTGGTGGAGGCCGGCCCCCGCCTGGCCGGCGCCTTCGCTCGACTGGGGCTGGTGGATGAGTAC
CGGCTGTTCGTCGCGCCGAAGTTCCTCGGCTCCAGCGCCCGTCCTTTGCTCGACTGGCCGCTGACGCGGATGGCCGATGC
GGCGCAGTTGCGGATCGACGACATCCGCGCGGTGGGCGACGACTGGCTGGTCACCGCGCGGCCCCATCCGCGGGACGCTT
GA

Protein sequence :
MNAADPLYMARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGEPHAEVHALRQAGENARGATAYVTLEPCSHF
GRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLLRLMQAGIAVQSGVLEAEARELNIGFIKRMEHGLPFVRVKLAMSLD
GRTAMASGESQWITGPSARSAVQRLRARSSVVLSGADTLLADDARLNVRPDELGLNAELTALAAARQPLRVLVDGRLRVP
LESAFYQAGPALVATCAAASARERFQDAGHELLALPSAEGHVDLHKLLVELAARGANEVLVEAGPRLAGAFARLGLVDEY
RLFVAPKFLGSSARPLLDWPLTRMADAAQLRIDDIRAVGDDWLVTARPHPRDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 6e-62 49
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 6e-62 49