Gene Information

Name : rph (PA14_70420)
Accession : YP_793808.1
Strain : Pseudomonas aeruginosa UCBPP-PA14
Genome accession: NC_008463
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 6276296 - 6277015 bp
Length : 720 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGAATCGTCCCAGTGGCCGTGCCGCCGACCAGCTGCGCCCGATCCGCATCACCCGCCATTACACCAAGCACGCAGAAGG
TTCGGTGCTGGTCGAGTTCGGCGATACCAAGGTGATCTGCACCGTCAGCGCCGAGTCCGGGGTGCCGCGCTTCCTCAAGG
GCCAGGGGCAGGGTTGGCTGACCGCCGAGTACGGCATGCTGCCGCGCTCCACCGGCGAGCGTAACCAGCGCGAGGCCAGC
CGCGGCAAGCAGGGCGGTCGTACCCTGGAGATCCAGCGCCTGATCGGCCGTTCCCTGCGAGCGGCGCTGGACCTCAGCAA
GCTCGGCGAGAACACCCTGTACATCGACTGCGACGTGATCCAGGCCGACGGCGGCACCCGCACCGCCTCGATCACCGGCG
CCACCGTGGCGCTGATCGACGCCCTGGCGGTGCTGAAGAAGCGTGGCGCGCTCAAGGGCAATCCGCTGAAGCAGATGGTC
GCCGCCGTTTCCGTGGGCATCTACCAGGGCGTGCCGGTCCTCGACCTGGACTACCTGGAGGATTCCGCCGCGGAAACCGA
CCTGAACGTAGTGATGACCGATGCCGGCGGCTTCATCGAGGTGCAGGGAACCGCCGAAGGCGCGCCGTTCCGTCCCGCCG
AGCTGAACGCCATGCTCGAACTGGCCCAGCAGGGCATGCAGGAGCTGTTCGAACTTCAGCGCGCCGCGCTGGCCGAATGA

Protein sequence :
MNRPSGRAADQLRPIRITRHYTKHAEGSVLVEFGDTKVICTVSAESGVPRFLKGQGQGWLTAEYGMLPRSTGERNQREAS
RGKQGGRTLEIQRLIGRSLRAALDLSKLGENTLYIDCDVIQADGGTRTASITGATVALIDALAVLKKRGALKGNPLKQMV
AAVSVGIYQGVPVLDLDYLEDSAAETDLNVVMTDAGGFIEVQGTAEGAPFRPAELNAMLELAQQGMQELFELQRAALAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 1e-68 64