Gene Information

Name : algR (PA14_69470)
Accession : YP_793734.1
Strain : Pseudomonas aeruginosa UCBPP-PA14
Genome accession: NC_008463
Putative virulence/resistance : Virulence
Product : alginate biosynthesis regulatory protein AlgR
Function : -
COG functional category : K : Transcription
COG ID : COG3279
EC number : -
Position : 6194758 - 6195504 bp
Length : 747 bp
Strand : -
Note : -

DNA sequence :
ATGAATGTCCTGATTGTCGATGACGAACCTCTGGCGCGAGAGCGCCTGGCCCGATTGGTAGGGCAACTGGACGGCTATCG
CGTCCTCGAGCCCTCGGCCAGCAATGGCGAAGAAGCGCTGACGCTGATCGACAGCCTCAAGCCCGATATCGTCCTGCTGG
ATATCCGCATGCCCGGTCTGGACGGCCTCCAGGTCGCGGCCAGACTCTGCGAGCGGGAAGCGCCGCCGGCTGTGATCTTC
TGCACGGCCCATGACGAATTCGCCCTGGAAGCCTTCCAGGTCAGCGCCGTGGGCTACCTGGTCAAGCCGGTGCGCAGCGA
AGACCTGGCCGAGGCGTTGAAGAAAGCCTCGCGACCGAACCGCGTGCAACTGGCCGCGCTGACCAAGCCCCCGGCCTCCG
GCGGCAGCGGTCCGCGCAGCCACATCAGTGCGCGGACCCGCAAGGGGATCGAGCTGATCCCGCTGGAAGAGGTGATCTTC
TTCATTGCCGACCACAAGTACGTGACCTTGCGTCATGCGCAGGGCGAGGTGCTGCTGGACGAGCCGTTGAAGGCGCTGGA
AGACGAGTTCGGCGAGCGCTTCGTGCGCATCCACCGCAACGCGCTGGTCGCCCGCGAACGGATCGAACGCCTGCAGCGTA
CGCCGCTGGGGCATTTCCAGCTCTACCTGAAAGGCCTCGACGGCGATGCACTGACCGTCAGCCGGCGGCACGTGGCCGGG
GTCAGGCGTCTGATGCATCAGCTCTGA

Protein sequence :
MNVLIVDDEPLARERLARLVGQLDGYRVLEPSASNGEEALTLIDSLKPDIVLLDIRMPGLDGLQVAARLCEREAPPAVIF
CTAHDEFALEAFQVSAVGYLVKPVRSEDLAEALKKASRPNRVQLAALTKPPASGGSGPRSHISARTRKGIELIPLEEVIF
FIADHKYVTLRHAQGEVLLDEPLKALEDEFGERFVRIHRNALVARERIERLQRTPLGHFQLYLKGLDGDALTVSRRHVAG
VRRLMHQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 2e-52 46
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 2e-52 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
algR YP_793734.1 alginate biosynthesis regulatory protein AlgR VFG0119 Protein 1e-114 100