Gene Information

Name : PA14_59860 (PA14_59860)
Accession : YP_792974.1
Strain : Pseudomonas aeruginosa UCBPP-PA14
Genome accession: NC_008463
Putative virulence/resistance : Unknown
Product : type III effector Hop protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5332241 - 5332600 bp
Length : 360 bp
Strand : +
Note : -

DNA sequence :
CTGATCTGCACGAGATTCGCCGTGAACACTCCACATCCATCCCTTCGCCGAAGCTGCCTGGCCGTCTTGGCCTGCAGTGC
GCTGGTCGCACAGGGAGCTTTCGCAGCGAGCGCCTCCGAGCAGGCGAACCTGGAGGTGATGATCCGGCAGCTCAACGCCC
TCGAGGACACCGCCCGCCGCAGTGCCCAGGGCGCCGATGAGCCCGGACAGCGCTTCTACTTCGACTACCCGCGCCTGGCC
GCTGACCTGCAGCGCATCCGCCAAGGCCTGCAGGACTACATGACGCCCAGCCGCGCCCAACCGCGTGACCCTTCCGACTT
ATCAGGGAATTACACCCTGCGCGGAGGGCCGATGCCATGA

Protein sequence :
MICTRFAVNTPHPSLRRSCLAVLACSALVAQGAFAASASEQANLEVMIRQLNALEDTARRSAQGADEPGQRFYFDYPRLA
ADLQRIRQGLQDYMTPSRAQPRDPSDLSGNYTLRGGPMP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
RL030 AAP84157.1 candidate type III effector Hop protein Not tested PAPI-1 Protein 2e-43 100
EXA41 ABD94650.1 conserved hypothetical protein Not tested ExoU island A Protein 6e-38 97
unnamed ABR13370.1 hypothetical protein Not tested PAGI-5 Protein 5e-37 96
pph76 CAI36117.1 candidate type III effector Hop protein Not tested PPHGI-1 Protein 2e-22 64