Gene Information

Name : PA14_59580 (PA14_59580)
Accession : YP_792948.1
Strain : Pseudomonas aeruginosa UCBPP-PA14
Genome accession: NC_008463
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 5301889 - 5303424 bp
Length : 1536 bp
Strand : +
Note : -

DNA sequence :
ATGACTTCCTCGCCCAACCTTGACCAGATGACCCCGGAACAGCTTCGTGCCTTGGCGGCACAGGCGTTGCAGTTGCAATC
CCAGGTCGAGGCGATGAGCAGGAAAATCCGCAACAATGAAACCCTCATCGAACAGTTCAAGTTCGAAATCGCTCTGCTCA
AACGCCACAAGTTTGCCAAGCGCAGCGAGCAAATCAGTTCGGCGCAAGGCAGCTTGCTGGATGACCTGCTCGACACCGAC
CTTGAAGCTATCGAGGCCGAGCTGAAACAACTCCTTCCAGCTTCGCCACAAGCCGAGCCACGGCAATCCCCGAAACGTTC
GCCATTGCCGCCGCAGTTCCCGCGCACGGTGATTCGCCACGAACCTGAAAATACCCAATGCGCCTGCGGCTGCCAACTTC
AACGCATCGGCGAAGACGTCAGCGAGAAGCTGGATTACACGCCGGGCGTGTTTACCGTCGAGCAACATGTGAGGGGCAAA
TGGGCCTGCCGTCAGTGCGAAACCCTGATCCAGGCGCCGGTGCCAGCCCAGGTTATTGATAAAGGCATCCCGACCGCAGG
TTTGTTGGCCCACGTGATGGTGGCCAAGTTTGCCGATCACTTGCCGCTGTACAGACAGGAAAAAATCTTTGGCCGCGCCG
GGCTGCCAATTGCCCGCTCGACCCTGGCGCAGTGGGTCGGACAAACTGGCGTGCGGCTTCAGCCACTGGTCGATGCACTG
CGTGAAGCCGTGCTGAACCAGGACGTGATCCACGCCGATGAAACACCGGTGCAAATGCTTGCACCAGGCGAGAAGAAAAC
CCACCGGGTCTATGTCTGGGCCTACAGCACGACGCCGTTTTCGGCGCTCAAAGCGGTGGTTTACGACTTCAGCCCAAGCC
GTGCCGGAGAACATGCACGCAACTTCCTAGGCGACTGGAATGGCAAGCTGGTCTGCGACGACTTCGCTGGATACAAGGCC
GGTTTTGAACAAGGCATCACTGAAATCGGCTGCATGGCTCATGCTCGCCGCAAGTTCTTCGACCTGCATGTCGCTAACAA
AAGCCAACTGGCCGAACAGGCGCTGCACTCAATTGGCGGTTTGTACGAGGTTGAACGCCAGGCTCGGGACATGAGCAACG
AAGACCGTTGGCGAATACGTCAGGAAATGGCGGTACCGATCAGCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGAC
CTGGTGCCCAACGGCTCGGCCACAGCTAAAGCCCTCGACTACAGCCTGAAACGCTGGGGAGCGCTGACGCGCTACCTGGA
CGATGGGGCTGTGCCCATCGACAACAATCAGGTGGAGAACCAGATACGGCCGTGGGCGCTCGGACGCTCGAACTGGTTAT
TTGCCGGATCGCTGCGCAGTGGCAAACGAGCAGCAGCTATCATGAGCCTGATCCAGTCCGCTCGCATGAACGGGCATGAT
CCGTATGCCTACCTGAAGGACGTGCTAACTCGCCTGCCGACGTTACGGTCGAAAGACATCAGCCAGTTGCTGCCGCATCA
GTGGGTACAGATCTAG

Protein sequence :
MTSSPNLDQMTPEQLRALAAQALQLQSQVEAMSRKIRNNETLIEQFKFEIALLKRHKFAKRSEQISSAQGSLLDDLLDTD
LEAIEAELKQLLPASPQAEPRQSPKRSPLPPQFPRTVIRHEPENTQCACGCQLQRIGEDVSEKLDYTPGVFTVEQHVRGK
WACRQCETLIQAPVPAQVIDKGIPTAGLLAHVMVAKFADHLPLYRQEKIFGRAGLPIARSTLAQWVGQTGVRLQPLVDAL
REAVLNQDVIHADETPVQMLAPGEKKTHRVYVWAYSTTPFSALKAVVYDFSPSRAGEHARNFLGDWNGKLVCDDFAGYKA
GFEQGITEIGCMAHARRKFFDLHVANKSQLAEQALHSIGGLYEVERQARDMSNEDRWRIRQEMAVPISKTLHDWMLAQRD
LVPNGSATAKALDYSLKRWGALTRYLDDGAVPIDNNQVENQIRPWALGRSNWLFAGSLRSGKRAAAIMSLIQSARMNGHD
PYAYLKDVLTRLPTLRSKDISQLLPHQWVQI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 0.0 100
tnpC AEZ06051.1 transposase Not tested Tn6167 Protein 2e-134 54
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 5e-64 42
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 1e-66 42
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 1e-71 42
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 6e-69 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PA14_59580 YP_792948.1 transposase VFG1700 Protein 2e-64 42
PA14_59580 YP_792948.1 transposase VFG1513 Protein 6e-67 42