|
Name : PA14_59540 (PA14_59540) Accession : YP_792944.1 Strain : Pseudomonas aeruginosa UCBPP-PA14 Genome accession: NC_008463 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : K : Transcription COG ID : COG0553 EC number : - Position : 5297117 - 5299366 bp Length : 2250 bp Strand : + Note : - DNA sequence : ATGAACGCTCTGACCCAACCGGCCGCCCTCGCCGCCTCCCACCTGAACATCAACCTGACCGACTTCATCGACGAGTTCGG CGACGAGCTCCTGGAGTCGCTCAATCGCTCCAACCCCCCGGTCTATACCGGCTCCGTCAACGCTCACCGCCAGTTGGTGA TGGACCGACTCAAGCGCAAGCCCTTCGCGGCCCAGGCCGAGGTCGTCCAGGCCATCACCGCCCTGCTGCTGGACCGTAAC GAGCAGGCCGGAATCATCAACGCCGAGATGGGCACCGGGAAAACCATGATGGCCATCGCTGTCGCAGCGGTCATGCACGC CGCCGGCTATCGCCGGACCCTGGTCGTCTCTCCGCCGCACCTGGTCTACAAGTGGCGCCGCGAGATCCTGGAGACCATCC CAGCCGCCCGCGTCTGGGTACTCAATGGCCCAGATACTCTACTCAAGCTGCTCAAGCTGCGAGATCAGATGGGCGACGCC TACGACGGGCGCCAGGAGTTCTTCATCCTCGGCCGCGTGCGGATGCGGATGGGTTTCCACTGGCGGCTCGCCTGCTGGAA GAAACGCGCCGCCGGCGGCCAACTGCTCGCTGCGTGCCCGGATTGCGGACAGGTCCTCGAGGACCTGGAAGGCAACCTGG TCACGGTGGAGGAGTTCGAGCGTGGTGACCGTCGACGTACCTGTTCCTCCTGCCGTGGGGCGCTCTGGACGCTGATCCGA CCAGGCAAGCCCGACGGCGGCAACCGGCGCGCAACGATTCTCAAGTCGATGTGCCGGATACCAACCATCGGCCCGGTCAG GGCGGAGCGCCTGCTGAACGACTTCGGCGAGGACTTCCTGGCCACGATGTTGGTGGACAACGTCTCGGAGTTCATCAACC TGATGGACGCCAAGGGCAACTTCGTCTTCAGCGATCGGCAGGCCAAACGCATGGAGCGATCGATGGCAAACATCGAGTTC GGCTTCGGTGAAGGCGGCTACCAACCGACCGAGTTCATCAAGCGCTACCTACCTGATGGCTACTTCGACCTGCTGGTGCT GGACGAGGGACATGAGTACAAGAACAGCGGCTCGGCCCAGGGCCAGGCCATGGGCGTTCTCGCAGCCAAGGCACGGAAAA CCGTGCTGCTGACCGGAACGCTCATGGGCGGCTACGCCGACGATCTGTTCTATCTCCTGTTCCGCATCCTCACCCAGCGC ATGATCGAGGACGGCTATCGGCCCAACGCGCGCGGCAGCATGGCTCCCGCAGCCATGTCGTTCATGCGCGACCACGGTGT GCTCAAGGATATCTACACCGAGCGCGACGGTGATTCGCACAAGACAGCGCGGGGCAAGAAGCTCTCGGTACGCACGGTGA AGGCTCCCGGCTTCGGCCCAAAGGGCATCCACCGCTTCGTATTGCCGTTCACCGTGTTCCTGAAGCTCAAGGATATTGGT GGCAACGTACTGCCCGACTACCAGGAGGAGTTCATCGACGTGCCCATGGCGCCTGAGCAGGCTTCGGCCTATCAGCGCCT GGCGGCCACGCTGACAGCGGAGCTCCGCCAGGCTCTGGCGCGACGAGATACCACGCTCCTGGGCGTGGTCCTCAACGTGC TGCTGGCTTGGCCGGACTGCTGTTTCCGACCGGAGATCGTCAAGCATCCGCGAACCCGGGACACACTGGCCTTCGTGCCA GCGATCTTCGGTGACGAGCAGTTGATACCCAAGGAGCAGGTGCTGGTGGACCTCTGCTTCGAGGAGAAAGCGAAGGGCCG CAAGGTTCTGGCATACACCGTCTACAGCGGGACGCGCGACACCACGTCCAGGCTGAAGAAAGTGCTCGAGCAATCCGGGC TGAAGGTGGCAGTGCTACGTGCTTCGGTCGATACCGCTCGACGCGAGGATTGGATCCTCGACCAGGTCGATCGCGGCATC GATGTGCTGATCACCAACCCGGAGCTGGTGAAGACCGGGCTGGACTTGCTCGACTTCCCGACCATCGCGTTCCTGCAAAC GGGCTACAACGTGTACACCCTGCAGCAGGCCGCGCGGCGGTCGTGGCGGATCGGGCAGAAGCACCCGGTGAGGGTGGTGT TCTTCGGCTACGCCGGCAGCTCGCAGATCACCTGCTTACAGCTGATGGCCAAGAAGATCGCTGTGGCTCAGAGCACGTCG GGAGACGTTCCCGAGTCAGGTCTCGACTCGTTGAACCAGGATGGGGATTCTGTGGAGATGGCGTTGGCACGACAACTCAT CGCAGCATGA Protein sequence : MNALTQPAALAASHLNINLTDFIDEFGDELLESLNRSNPPVYTGSVNAHRQLVMDRLKRKPFAAQAEVVQAITALLLDRN EQAGIINAEMGTGKTMMAIAVAAVMHAAGYRRTLVVSPPHLVYKWRREILETIPAARVWVLNGPDTLLKLLKLRDQMGDA YDGRQEFFILGRVRMRMGFHWRLACWKKRAAGGQLLAACPDCGQVLEDLEGNLVTVEEFERGDRRRTCSSCRGALWTLIR PGKPDGGNRRATILKSMCRIPTIGPVRAERLLNDFGEDFLATMLVDNVSEFINLMDAKGNFVFSDRQAKRMERSMANIEF GFGEGGYQPTEFIKRYLPDGYFDLLVLDEGHEYKNSGSAQGQAMGVLAAKARKTVLLTGTLMGGYADDLFYLLFRILTQR MIEDGYRPNARGSMAPAAMSFMRDHGVLKDIYTERDGDSHKTARGKKLSVRTVKAPGFGPKGIHRFVLPFTVFLKLKDIG GNVLPDYQEEFIDVPMAPEQASAYQRLAATLTAELRQALARRDTTLLGVVLNVLLAWPDCCFRPEIVKHPRTRDTLAFVP AIFGDEQLIPKEQVLVDLCFEEKAKGRKVLAYTVYSGTRDTTSRLKKVLEQSGLKVAVLRASVDTARREDWILDQVDRGI DVLITNPELVKTGLDLLDFPTIAFLQTGYNVYTLQQAARRSWRIGQKHPVRVVFFGYAGSSQITCLQLMAKKIAVAQSTS GDVPESGLDSLNQDGDSVEMALARQLIAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| RL063 | AAP84188.1 | plasmid related protein | Not tested | PAPI-1 | Protein | 0.0 | 100 |
| unnamed | ABR13404.1 | putative helicase | Not tested | PAGI-5 | Protein | 0.0 | 99 |
| pph67 | CAI36108.1 | superfamily II DNA/RNA helicase | Not tested | PPHGI-1 | Protein | 0.0 | 86 |
| ORF C71 | AAN62165.1 | conserved hypothetical plasmid protein | Not tested | PAGI-2(C) | Protein | 0.0 | 72 |
| ORF SG81 | AAN62302.1 | conserved hypothetical plasmid protein | Not tested | PAGI-3(SG) | Protein | 0.0 | 69 |
| yea | AAW83099.1 | Yea | Not tested | GGI | Protein | 3e-179 | 51 |
