Gene Information

Name : hxcT (PA14_55490)
Accession : YP_792613.1
Strain : Pseudomonas aeruginosa UCBPP-PA14
Genome accession: NC_008463
Putative virulence/resistance : Virulence
Product : HxcT pseudopilin
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 4940113 - 4940562 bp
Length : 450 bp
Strand : -
Note : -

DNA sequence :
ATGGATGTCGTGCAGTTCAGCTCCAGCCCGAAAGGACATCGGGGACAGCGGGGCTTCACCCTGATCGAGATCATGGTGGT
GGTGGTGATCCTCGGCATCCTCGCCGCGATGGTGGTGCCCAAGGTGCTCGACCGTCCCGACCAGGCCCGTGCCACCGCGG
CGCGCCAGGACATCTCCGGGCTGATGCAGGCGCTCAAGCTCTACCGCCTCGACCAGGGCCGCTATCCGAGCCAGGCGCAG
GGCTTGAAGGTGCTCGCGGAGCGTCCTGCCGATGCCTCGGCGAGCAACTGGCGCTCGTACCTGGAGCGCCTGCCCAACGA
CCCCTGGGGCAAGCCCTACCAGTACCTGAATCCCGGCGTGAACGGCGAGATCGACGTGTTCTCCCTCGGCGCCGACGGGC
AGCCGGGCGGCGAGGGCATCAACGCCGACATCGGCTCCTGGCAGCTCTGA

Protein sequence :
MDVVQFSSSPKGHRGQRGFTLIEIMVVVVILGILAAMVVPKVLDRPDQARATAARQDISGLMQALKLYRLDQGRYPSQAQ
GLKVLAERPADASASNWRSYLERLPNDPWGKPYQYLNPGVNGEIDVFSLGADGQPGGEGINADIGSWQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 3e-34 53
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 3e-34 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hxcT YP_792613.1 HxcT pseudopilin VFG1871 Protein 2e-40 59
hxcT YP_792613.1 HxcT pseudopilin VFG0180 Protein 1e-36 57
hxcT YP_792613.1 HxcT pseudopilin VFG2050 Protein 8e-35 52