Gene Information

Name : cat (PA14_55170)
Accession : YP_792588.1
Strain : Pseudomonas aeruginosa UCBPP-PA14
Genome accession: NC_008463
Putative virulence/resistance : Resistance
Product : chloramphenicol acetyltransferase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : -
Position : 4900296 - 4900829 bp
Length : 534 bp
Strand : +
Note : -

DNA sequence : 
ATGGGCAACTATTTCGAGAGCCCCTTCAGGGGCAAGCTGCTCTCGGAACAGGTCAGCAACCCGAACATTCGGGTGGGGCG
CTACAGCTACTACTCCGGCTACTATCACGGGCATTCCTTCGACGACTGCGCCCGCTACCTGATGCCGGACCGCGACGACG
TGGACAAGCTGGTCATCGGCAGTTTCTGCTCGGTCGGCAGTGGCGCCGCCTTCATCATGGCCGGCAACCAGGGACACCGC
GCCGAGTGGGCATCGACCTTCCCCTTCCACTTCATGCACGAAGAGCCGGCCTTCGCCGGCGCCGTGAACGGCTACCAGCC
AGCGGGCGACACGCTGATCGGCCATGACGTCTGGATCGGTACCGAGGCGATGTTCATGCCCGGCGTACGGGTCGGCCACG
GAGCCATCATCGGCAGCCGCGCGCTGGTGACCGGCGATGTCGAGCCCTATGCCATCGTCGGCGGTAACCCGGCCCGGACC
ATTCGTAAGCGCTTTTCCGATGGCGATATCCAGAACCTGCTGGAAATGGCCTAG

Protein sequence : 
MGNYFESPFRGKLLSEQVSNPNIRVGRYSYYSGYYHGHSFDDCARYLMPDRDDVDKLVIGSFCSVGSGAAFIMAGNQGHR
AEWASTFPFHFMHEEPAFAGAVNGYQPAGDTLIGHDVWIGTEAMFMPGVRVGHGAIIGSRALVTGDVEPYAIVGGNPART
IRKRFSDGDIQNLLEMA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 8e-61 77
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 8e-61 77
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 2e-59 76

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cat YP_792588.1 chloramphenicol acetyltransferase NC_002516.2.878374.p Protein 4e-73 99
cat YP_792588.1 chloramphenicol acetyltransferase AF322577.2.gene4.p01 Protein 4e-61 77
cat YP_792588.1 chloramphenicol acetyltransferase AY740681.1.gene5.p01 Protein 4e-61 77
cat YP_792588.1 chloramphenicol acetyltransferase AY123251.gene2.p01 Protein 7e-60 76
cat YP_792588.1 chloramphenicol acetyltransferase JF268688.1.gene6.p01 Protein 1e-52 70
cat YP_792588.1 chloramphenicol acetyltransferase CP001581.1.gene990.p Protein 3e-29 45