Gene Information

Name : PA14_54860 (PA14_54860)
Accession : YP_792559.1
Strain : Pseudomonas aeruginosa UCBPP-PA14
Genome accession: NC_008463
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2003
EC number : -
Position : 4860837 - 4861445 bp
Length : 609 bp
Strand : -
Note : -

DNA sequence :
ATGTCTTGGGAGTTTGGCCGGCGGCGAACGTCGCGAGGAGTTGCAGCATCCCCAATCCGATGCGAGACAAAAGTGTCCCG
CCGCCCCACACCGTTCGCGCCTGCATGGGTGATCCTTCCGAGTTCAAGGAGGATTTCCATGACGGCACCCAGGATGCGAG
CCTCGACCAAGGCAGCGACTCGCCGTGATGAAGACCAGTTGGTCCAGCGTGCAATAGCCGTGCTGGAGCGCCGTATGTTC
CGGCGCGGCCAGGAATTACTGAGCCCGCGCGGCCTGCGCCAATACCTTCGACTGAGGCTGGTGGGGAAAAGCGAGGAGGT
GTTTGCCGCCGTGTTTCTCGACGCCCAATGGCGCGCGCTGTTCCGCGGCACAGTCAATGCGGCGCCAATGTATGCGCGCG
TGGTGGTCAAGCGCGCGCTTCGGCACAATGCGGTCGGCGTCGTCGTCGCGCACAACCATCCATCAGGCTTGGCCACCCCG
AGCCAAGCCGATATTGCTGCCACTCGGCAGTTGAAGGCGGCATTGAACCTTGTCGACATCGAGCTGCTGGATCATTTCGT
CATCGGACGCGGTGAGCCCTTTTCCTTTTTCGACGCCCAGCTACTGTGA

Protein sequence :
MSWEFGRRRTSRGVAASPIRCETKVSRRPTPFAPAWVILPSSRRISMTAPRMRASTKAATRRDEDQLVQRAIAVLERRMF
RRGQELLSPRGLRQYLRLRLVGKSEEVFAAVFLDAQWRALFRGTVNAAPMYARVVVKRALRHNAVGVVVAHNHPSGLATP
SQADIAATRQLKAALNLVDIELLDHFVIGRGEPFSFFDAQLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
radC AAN62275.1 putative DNA repair protein RadC Not tested PAGI-3(SG) Protein 3e-26 49
c5152 NP_757000.1 radC-like protein yeeS Not tested PAI II CFT073 Protein 2e-13 43
z1217 CAD33787.1 Z1217 protein Not tested PAI I 536 Protein 2e-12 43
Z1217 NP_286752.1 RadC family DNA repair protein Not tested TAI Protein 2e-12 43
ECO103_3589 YP_003223446.1 radC-like protein YeeS Not tested LEE Protein 1e-12 43
yeeS AAZ04458.1 putative RadC-like protein Not tested PAI I APEC-O1 Protein 1e-13 43
yeeS YP_854323.1 radC-like protein YeeS Not tested PAI I APEC-O1 Protein 2e-13 43
yeeS ADD91702.1 YeeS Not tested PAI-I AL862 Protein 2e-12 43
yeeS CAE85201.1 YeeS protein Not tested PAI V 536 Protein 1e-12 43
yeeS CAI43846.1 YeeS protein Not tested LEE Protein 1e-12 43
unnamed AAL08475.1 unknown Not tested SRL Protein 1e-12 43
aec73 AAW51756.1 Aec73 Not tested AGI-3 Protein 1e-12 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PA14_54860 YP_792559.1 hypothetical protein VFG1528 Protein 7e-13 43
PA14_54860 YP_792559.1 hypothetical protein VFG1066 Protein 5e-13 43