Gene Information

Name : PA14_05230 (PA14_05230)
Accession : YP_788574.1
Strain : Pseudomonas aeruginosa UCBPP-PA14
Genome accession: NC_008463
Putative virulence/resistance : Resistance
Product : cystathionine gamma-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 456745 - 457929 bp
Length : 1185 bp
Strand : +
Note : -

DNA sequence :
ATGAGCCAGCACGACCAGCATCCCGACGCCCCGGCCCAGGCCTTCGCGACCCGGGTCATCCACGCCGGGCAGGCCCCCGA
TCCCTCGACCGGCGCGATCATGCCGCCGATCTATGCCAACTCCACCTACATCCAGGAAAGCCCCGGGGTACACAAGGGGC
TCGACTACGGCCGCTCGCACAACCCGACCCGCTGGGCCCTGGAGCGCTGCGTGGCCGACCTCGAGGGCGGCGCCCAGGCC
TTCGCCTTCGCCTCCGGCCTGGCGGCGATCTCCTCGGTGCTGGAGCTGCTCGACGCCGGTTCCCACATCGTTTCCGGAAA
TGACCTCTACGGCGGTACCTTCCGCCTGTTCGAGCGGGTCCGCCGGCGCAGCGCCGGGCATCGCTTCAGCTTCGTCGACC
CGACCGACCTGCAGGCCTTCGAGGCCGCGCTGACCCCGGAAACCCGCATGGTCTGGGTGGAAACCCCGAGCAACCCGCTG
CTGCGCCTCACCGACCTGCGCGCCATCGCCCAGCTCTGCCGCGCCCGCGGCATCATCAGCGTGGCCGACAACACCTTCGC
CAGCCCCTACATCCAGCGCCCCCTGGAACTGGGCTTCGACGTGGTGGTGCACTCCACCACCAAGTACCTGAACGGCCATT
CCGACGTGATCGGCGGCATCGCCATCGTCGGCGACAACCCGGACCTGCGCGAGCGCCTGGGCTTCCTGCAGAACTCGGTG
GGCGCCATCTCCGGGCCGTTCGACGCCTTCCTCACCCTGCGCGGGGTGAAGACCCTGGCGCTGCGCATGGAGCGCCATTG
CAGCAACGCCCTGGCCCTGGCCCAGTGGCTGGAGCGCCAGCCGCAGGTGGCGCGGGTCTACTACCCCGGCCTGGCTTCGC
ACCCGCAGCATGAGCTGGCGAAACGGCAGATGCGTGGCTTCGGCGGGATGATCTCCCTCGACCTGCGCTGCGACCTGGCC
GGCGCCCGGCGCTTCCTGGAGAACGTGCGGATCTTCTCCCTGGCGGAGAGCCTGGGCGGGGTGGAAAGCCTGATCGAGCA
TCCGGCGATCATGACCCACGCCAGCATCCCGGCGGAAACCCGCGCCGACCTGGGCATCGGTGACTCGCTGATCCGCCTGT
CGGTGGGCGTCGAGGCGCTGGAGGACCTGCAGGCCGACCTGGCGCAGGCGCTGGCGAAGATCTGA

Protein sequence :
MSQHDQHPDAPAQAFATRVIHAGQAPDPSTGAIMPPIYANSTYIQESPGVHKGLDYGRSHNPTRWALERCVADLEGGAQA
FAFASGLAAISSVLELLDAGSHIVSGNDLYGGTFRLFERVRRRSAGHRFSFVDPTDLQAFEAALTPETRMVWVETPSNPL
LRLTDLRAIAQLCRARGIISVADNTFASPYIQRPLELGFDVVVHSTTKYLNGHSDVIGGIAIVGDNPDLRERLGFLQNSV
GAISGPFDAFLTLRGVKTLALRMERHCSNALALAQWLERQPQVARVYYPGLASHPQHELAKRQMRGFGGMISLDLRCDLA
GARRFLENVRIFSLAESLGGVESLIEHPAIMTHASIPAETRADLGIGDSLIRLSVGVEALEDLQADLAQALAKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-73 47
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 9e-75 47
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 6e-51 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PA14_05230 YP_788574.1 cystathionine gamma-lyase BAC0207 Protein 1e-67 46