Gene Information

Name : PA14_51550 (PA14_51550)
Accession : YP_792287.1
Strain : Pseudomonas aeruginosa UCBPP-PA14
Genome accession: NC_008463
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 4583761 - 4584861 bp
Length : 1101 bp
Strand : +
Note : -

DNA sequence :
TTGTGGTTGACCTGCACGCCACAGCAGGATGTGCAGGCGGCGTTAGCTACAGCGTCGATACTCCTGGGCCAGTTCCACCA
GTTGGGCGTGCAGCTCGGTCGGTACACTAGCCTCGACCCGCTTGAGGAAGTCGAGAAGAACGCTTCTGCACTGCCGTCTC
CTGCTTGGAAAACGGATTCTACTAAGTTCAGCGTGGTACTGAAATCGGGGGGCAGGTCAATCGACAAAGGTATCCCGACC
GCAGGTTTGTTGGCCCACGTGATGGTGGCCAAGTTTGCCGATCACTTGCCGCTGTACCGGCAGGAGAAAATCTTTGGCCG
CGCCGGGCTGGCAATTGCTCGCTCGACCCTGGCGCAGTGGGTCGGACAAACCGGCGTGCGGCTTCAGCCACTGGTCGATG
CACTGCGTGAAGCCGTGCTGAACCAGGGCGTGATCCACGCTGATGAAACACCGGTGCAAATGCTTGCGCCAGGCGAGAAG
AAAACCCACCGGGCCTATGTCTGGGCGTACAGCACGACGCCGTTTTCAGGGCTCAAAGCGGTGGTTTACGACTTCAGCCC
AAGCCGTGCTGGCGAACATGCGCGCAACTTCCTGGGTGACTGGAACGGCAAGCTGGTCTGCGACGACTTCGCTGGCTACA
AAGCCGGTTTCGAACAAGGCATCACTGAAATCGGCTGCATGGCCCACGCCCGGCGCAAGTTCTTTGATTTGCACGTGGCG
AACAAAAGTCAGCTGGCTGAACAGGCCCTGCACTCGATCAGCGGCTTGTACGAGGTCGAACGTCAGGCGCGGGACATGAG
TGATGAAGAGCGCTGGCGAATACGACAAGAATTGGCGGTGCCGATCCTCAAAAAACTGCATGACTGGATGTTGGCTCAGC
GAGACCTGGTGCCCAATGGATCAGCCACGGCCAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTAC
CTGGACGATGGGGCTGTGCCCATCGATAACAATCAGGTCGAGAACCAAATACGGCCATGGGCGCTCGGGCGTTCGAACTG
GCTGTTTGCCGGGTCGCTGCGCAGTGGTAAACGGGCGGCTGCAATCATGAGCCTGATCTAG

Protein sequence :
MWLTCTPQQDVQAALATASILLGQFHQLGVQLGRYTSLDPLEEVEKNASALPSPAWKTDSTKFSVVLKSGGRSIDKGIPT
AGLLAHVMVAKFADHLPLYRQEKIFGRAGLAIARSTLAQWVGQTGVRLQPLVDALREAVLNQGVIHADETPVQMLAPGEK
KTHRAYVWAYSTTPFSGLKAVVYDFSPSRAGEHARNFLGDWNGKLVCDDFAGYKAGFEQGITEIGCMAHARRKFFDLHVA
NKSQLAEQALHSISGLYEVERQARDMSDEERWRIRQELAVPILKKLHDWMLAQRDLVPNGSATAKALDYSLKRWVALTRY
LDDGAVPIDNNQVENQIRPWALGRSNWLFAGSLRSGKRAAAIMSLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
RS12 AAP82957.1 transposase Not tested PAPI-2 Protein 7e-171 100
EXB16 ABD94703.1 ISPpu14 transposase Orf3 Not tested ExoU island B Protein 4e-136 99
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 7e-53 43
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 5e-51 42
unnamed AAK00463.1 unknown Not tested SHI-1 Protein 6e-39 41
SF2972 NP_708746.1 hypothetical protein Not tested SHI-1 Protein 2e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PA14_51550 YP_792287.1 transposase VFG1700 Protein 3e-53 43
PA14_51550 YP_792287.1 transposase VFG1513 Protein 3e-51 42
PA14_51550 YP_792287.1 transposase VFG0634 Protein 9e-38 41