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Name : pscU (PA14_42660) Accession : YP_791555.1 Strain : Pseudomonas aeruginosa UCBPP-PA14 Genome accession: NC_008463 Putative virulence/resistance : Virulence Product : translocation protein in type III secretion Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4792 EC number : - Position : 3793295 - 3794344 bp Length : 1050 bp Strand : + Note : - DNA sequence : ATGAGCGCCGAGAAGACCGAGCAGCCCACGGCGAAGAAGCTGCGCGACGCCCGCAGGCAGGGCCAGGTGGTGAAGAGCAA GGAAATTGTCTCCAGCGCGTTGATCCTGTCGCTGGTGGCGCTGCTGATGGGCTTTTCCGACTACTACCTGGAGCATCTCG GCAAGCTGCTCCTGCTGCCCGCCGAGTACATCGACCTGCCGTTTCGCCAGGCGCTGGAGACCATCCTGGAGAACCTTCTC CAGGAACTCCTCTACCTGCTGGCGCCGGTCCTGCTGGTCGCGGCGCTGGTGGTGGTGCTCAGCCATGTCGGCCAGTACGG CTTCCTGCTCAGCCTCGACAGCGTCAAGCCGGACCTGAAGAAGATCAACCCGGTGGAGGGCGCGAAGAAGATCTTCTCGA TCCGGAGCCTGGTGGAGTTCCTCAAGTCGACCCTGAAGGTCGCCCTGCTCTCCCTGCTGGTCTGGCTGACCTTGCAGGGC AACCTGGCCAGCCTCCTGCGGATTCCCGCCTGCGGGCTGGACTGCGTGGCACCGGTGAGCGGGCTGATGCTCAGGCAACT GATGCTGGTCTGCGCGGTCGGCTTCCTGGCGATTGCCGTCGCCGACTACGCCTTCGAACGCCACCAGCACTACAAGCAGT TGCGCATGAGCAAGGACGAAGTGAAGCGCGAGTACAAGGAGATGGAGGGCAGCCCGGAGATCAAGAGCAAGCGTCGGCAA TTCCATCAGGAACTGCAATCGAGCAACCTGCGCGCGGATGTCCGGCGTTCCTCGGTGATCGTCGCCAACCCGACCCACGT CGCCATCGGCATACGCTATCGACGCGGCGAAACACCCCTGCCGCTGATCACCCTGAAGCACACCGACGCCCTGGCCCTGC GGGTCCGGCGCATCGCCGAGGAAGAAGGAATCCCGGTGCTGCAACGAGTTCCGCTGGCACGGGCGCTGCTGCGCGACGGC AATGTCGACCAGTACATACCGGCGGACCTGATCCAGGCCACCGCCGAAGTCCTGCGCTGGCTGGAAAGCCAGCAGACGGA TACACCCTGA Protein sequence : MSAEKTEQPTAKKLRDARRQGQVVKSKEIVSSALILSLVALLMGFSDYYLEHLGKLLLLPAEYIDLPFRQALETILENLL QELLYLLAPVLLVAALVVVLSHVGQYGFLLSLDSVKPDLKKINPVEGAKKIFSIRSLVEFLKSTLKVALLSLLVWLTLQG NLASLLRIPACGLDCVAPVSGLMLRQLMLVCAVGFLAIAVADYAFERHQHYKQLRMSKDEVKREYKEMEGSPEIKSKRRQ FHQELQSSNLRADVRRSSVIVANPTHVAIGIRYRRGETPLPLITLKHTDALALRVRRIAEEEGIPVLQRVPLARALLRDG NVDQYIPADLIQATAEVLRWLESQQTDTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscU | AAO18037.1 | LscU | Virulence | TTSS locus | Protein | 8e-90 | 71 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pscU | YP_791555.1 | translocation protein in type III secretion | VFG0185 | Protein | 1e-120 | 99 |
| pscU | YP_791555.1 | translocation protein in type III secretion | VFG0397 | Protein | 4e-87 | 67 |
