Gene Information

Name : pscT (PA14_42640)
Accession : YP_791554.1
Strain : Pseudomonas aeruginosa UCBPP-PA14
Genome accession: NC_008463
Putative virulence/resistance : Virulence
Product : translocation protein in type III secretion
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4791
EC number : -
Position : 3792510 - 3793298 bp
Length : 789 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCGTCCAGGACCTGCAGCAACTGCTGCTGACCTACAGCCTGCTGCTGCCGCGGATCATCAGTTGCTTCGTGGTCCT
GCCGGTGCTGGCCAAGCAGACCCTGGGCGGCGGCCTGGTGCGCAACGGCGTGGCCTGCTCGCTGGCGCTGTTCGCCTACC
CGATCGTCGCCGGCAGCCTGCCGCCGGCCCTCGGCGCGCTGGACATCGCCCTGCTGATCGGCAAGGAAGTGCTGCTCGGC
CTGCTCATCGGCTTCGTCGCCACCATTCCCTTCTGGGCCATGGAAGCGACCGGCTTCATCATCGACAACCAGCGTGGCGC
GGCACTCGCCTCGACCCTCAACCCCAGCCTGGGCAGCCAGACCAGCCCCACCGGGCTGTTGCTGACGCAGACGCTGATCA
CCCTGTTCTTCTCCGGCGGCGCCTTCCTCGCGCTGGTCGGCTCGCTGTTCAGGAGCTATGCCAGTTGGCCGGTGAGCAGT
TTCTTCCCGCAGTTCGGCAGCCAATGGGTGGCATTCTTCTACGCGCAGTTCTCGCAGATGCTGATGCTCTGCGCGCTGTT
CGCCGCGCCGCTGCTGATCGCCATGTTCCTCGCCGAGTTCGGCCTGGCGCTGGTCAGCCGCTTCGCCCCGTCGCTGAACG
TGTTCATCCTCGCCATGCCGATCAAGAGCCTGGTCGCCAGCCTGCTGCTGGTGCTCTACCTGGGCATCCTCATGGAGCAC
GCCTACGATGCCCTGCTGCTCGCCGTCGACCCGCTGCGCCTGCTGCGTCCCGTGCTGGAGACGCCATGA

Protein sequence : 
MSVQDLQQLLLTYSLLLPRIISCFVVLPVLAKQTLGGGLVRNGVACSLALFAYPIVAGSLPPALGALDIALLIGKEVLLG
LLIGFVATIPFWAMEATGFIIDNQRGAALASTLNPSLGSQTSPTGLLLTQTLITLFFSGGAFLALVGSLFRSYASWPVSS
FFPQFGSQWVAFFYAQFSQMLMLCALFAAPLLIAMFLAEFGLALVSRFAPSLNVFILAMPIKSLVASLLLVLYLGILMEH
AYDALLLAVDPLRLLRPVLETP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscT AAO18038.1 LscT Virulence TTSS locus Protein 1e-59 79

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pscT YP_791554.1 translocation protein in type III secretion VFG0186 Protein 1e-67 99
pscT YP_791554.1 translocation protein in type III secretion VFG0396 Protein 1e-54 72