Gene Information

Name : pcr1 (PA14_42540)
Accession : YP_791546.1
Strain : Pseudomonas aeruginosa UCBPP-PA14
Genome accession: NC_008463
Putative virulence/resistance : Virulence
Product : protein in type III secretion
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3786451 - 3786729 bp
Length : 279 bp
Strand : -
Note : -

DNA sequence : 
ATGGCATACGGGCCTTCTGAATTGACCGGCGCAGTCATCGCCTTGCTCGAGAAGCGCTGGGTCGGCGTCGCCGAGGTGCA
GGCGTTGCTCGAGCCGTTGCCGCTGGCCGACGTCGCCCGGCAGATCCATTTCTTCCGCGAACTGAAGCGTCTCTACCGCC
TGTTGCCGGTCGAAGTGTTCGGCGACGACGAGCAGCGCCAGAATCTTTTGAATGCCTGCCAGATGGCACTCGACCTGGCG
ATCGAGCGCGAAGAGGAGCAGCAGCATGGACTGGGTTGA

Protein sequence : 
MAYGPSELTGAVIALLEKRWVGVAEVQALLEPLPLADVARQIHFFRELKRLYRLLPVEVFGDDEQRQNLLNACQMALDLA
IEREEEQQHGLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssA AAO18046.1 LssA Virulence TTSS locus Protein 2e-25 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pcr1 YP_791546.1 protein in type III secretion VFG0194 Protein 1e-38 100
pcr1 YP_791546.1 protein in type III secretion VFG0388 Protein 3e-19 46