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Name : popB (PA14_42450) Accession : YP_791537.1 Strain : Pseudomonas aeruginosa UCBPP-PA14 Genome accession: NC_008463 Putative virulence/resistance : Virulence Product : translocator protein PopB Function : - COG functional category : S : Function unknown COG ID : COG5613 EC number : - Position : 3779963 - 3781135 bp Length : 1173 bp Strand : - Note : - DNA sequence : ATGAATCCGATAACGCTTGAACGCGCCGGACTGCCCTACGGGGTGGCCGACGCCGGGGATATCCCGGCGCTCGGCAGGCC GGTCGCGAGGGATGTCGAGAGTCTGCGGGTGGAGCGCCTGGCGGCGCCGGCCGCGGCTTCCGCGAGCGGCACGGGGGTGG CGCTGACGCCGCCGTCCGCAGCCAGCCAGCAGCGCCTGGAGGTCGCCAATCGTGCGGAGATCGCCAGCCTGGTGCAAGCA GTGGGCGAGGATGCCGGACTGGCGCGGCAGGTTGTGCTGGCCGGCGCTTCGACGCTGTTGTCCGCTGGCCTGATGTCGCC GCAGGCGTTCGAGATCGAGCTGGCGAAAATCACCGGCGAAGTCGAGAACCAGCAGAAGAAACTCAAGCTGACCGAAATCG AGCAGGCGCGAAAGCAGAACCTGCAGAAGATGGAGGACAACCAGCAGAAGATCAGGGAATCGGAAGAAGCCGCGAAAGAA GCCCAGAAGTCCGGTCTGGCAGCCAAAATCTTTGGTTGGATCAGTGCAATAGCTTCGATCATCGTCGGCGCAATCATGGT GGCAACCGGCGTCGGCGCGGCCGCGGGTGCACTGATGATCGCGGGCGGTGTCATGGGAGTGGTCTCCCAGTCGGTACAGC AGGCAGCCGCGGACGGATTGATCAGCAAGGAAGTGATGGAAAAGCTCGGCCCGGCACTGATGGGTATCGAGATCGCCGTC GCGCTGCTGGCGGCGGTGGTCAGCTTCGGCGGCTCAGCGGTCGGCGGGCTGGCCAAGCTGGGCGCGAAGATCGGCGGCAA GGCGGCCGAGATGACCGCCAGCCTGGCGAGCAAGGTCGCCGACCTGGGCGGCAAGTTCGGCAGTTTGGCCGGCCAATCGC TGTCGCACTCGCTGAAACTCGGCGTGCAGGTTTCCGACCTGACCCTGGACGTCGCCAACGGCGCGGCCCAGGCCACTCAT TCGGGATTCCAGGCGAAGGCCGCGAACCGCCAGGCCGACGTGCAGGAATCGCGTGCCGACCTGACCACCCTGCAGGGCGT GATCGAGCGCCTGAAGGAAGAGCTGAGCCGCATGCTGGAAGCATTCCAGGAAATCATGGAGCGGATCTTCGCCATGCTCC AGGCCAAGGGTGAAACCCTGCACAACCTGTCCAGCCGACCGGCAGCGATCTGA Protein sequence : MNPITLERAGLPYGVADAGDIPALGRPVARDVESLRVERLAAPAAASASGTGVALTPPSAASQQRLEVANRAEIASLVQA VGEDAGLARQVVLAGASTLLSAGLMSPQAFEIELAKITGEVENQQKKLKLTEIEQARKQNLQKMEDNQQKIRESEEAAKE AQKSGLAAKIFGWISAIASIIVGAIMVATGVGAAAGALMIAGGVMGVVSQSVQQAAADGLISKEVMEKLGPALMGIEIAV ALLAAVVSFGGSAVGGLAKLGAKIGGKAAEMTASLASKVADLGGKFGSLAGQSLSHSLKLGVQVSDLTLDVANGAAQATH SGFQAKAANRQADVQESRADLTTLQGVIERLKEELSRMLEAFQEIMERIFAMLQAKGETLHNLSSRPAAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lopB | AAO18055.1 | LopB | Virulence | TTSS locus | Protein | 2e-41 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| popB | YP_791537.1 | translocator protein PopB | VFG0203 | Protein | 6e-110 | 99 |
| popB | YP_791537.1 | translocator protein PopB | VFG0379 | Protein | 1e-30 | 43 |
