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Name : pscC (PA14_42350) Accession : YP_791529.1 Strain : Pseudomonas aeruginosa UCBPP-PA14 Genome accession: NC_008463 Putative virulence/resistance : Virulence Product : Type III secretion outer membrane protein PscC precursor Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 3773504 - 3775306 bp Length : 1803 bp Strand : - Note : - DNA sequence : ATGCGCCGCCTGCTGATCGGCGGACTGCTGGCGCTGCTGCCTGGCGCGGTCTTGCGCGCGCAGCCGCTGGACTGGCCCAG CCTGCCTTACGACTATGTGGCGCAGGGCGAAAGCCTGCGCGACGTGCTGGCCAACTTCGGCGCCAACTACGATGCCTCGG TGATCGTCAGCGACAAGGTCAACGACCAGGTCAGCGGTCGCTTCGACCTGGAAAGCCCGCAGGCCTTCCTGCAGTTGATG GCCTCCCTCTACAACCTCGGCTGGTACTACGACGGCACCGTGCTGTACGTATTCAAGACCACCGAGATGCAGTCGCGGCT GGTGAGGCTGGAGCAGGTCGGCGAGGCCGAGCTGAAGCGCGCGCTGACCGCCGCCGGCATCTGGGAACCGCGCTTCGGCT GGCGTGCCGACCCTTCCGGGCGGCTGGTGCACGTGTCCGGTCCGGGGCGCTATCTCGAACTGGTCGAGCAGACCGCCCAG GTGCTGGAGCAGCAATACACCCTGCGCAGCGAAAAGACCGGCGACCTCAGCGTGGAGATCTTCCCGCTGCGCTATGCGGT CGCCGAGGACCGCAAGATCGAGTACCGCGACGACGAGATCGAGGCGCCGGGCATCGCCAGCATCCTCTCGCGGGTGCTCA GCGATGCCAACGTGGTTGCGGTGGGCGACGAGCCGGGCAAGCTGCGCCCGGGACCGCAATCGAGCCATGCGGTGGTCCAG GCGGAACCGTCGCTGAACGCGGTGGTGGTGCGCGACCACAAGGACCGGTTGCCCATGTATCGCCGCCTGATCGAAGCCCT CGACCGGCCCTCGGCGCGGATCGAGGTCGGCTTGTCGATCATCGACATCAATGCCGAGAACCTCGCCCAGCTGGGCGTCG ACTGGAGCGCCGGGATTCGCCTGGGCAACAACAAGTCGATCCAGATCCGCACCACCGGCCAGGATAGCGAGGAGGGCGGC GGCGCCGGTAACGGCGCGGTCGGCAGCCTGGTGGACAGTCGCGGGCTGGATTTCCTGCTGGCCAAGGTCACCCTGTTGCA GAGCCAGGGGCAGGCGCAGATCGGATCCCGGCCGACCCTGCTGACCCAGGAGAATACCCAGGCGGTGCTCGACCAGAGCG AAACCTACTATGTGCGGGTCACGGGCGAGCGGGTGGCCGAGCTGAAGGCGATCACCTACGGCACCATGCTGAAAATGACG CCGCGAGTGGTGACTCTCGGCGATACGCCGGAGATCAGCCTCAGCCTGCACATCGAGGACGGCAGCCAGAAACCCAACAG CGCCGGCCTGGACAAGATCCCCACGATCAACCGCACGGTGATCGATACCATCGCCCGCGTGGGCCATGGCCAGAGCCTGC TGATCGGCGGCATCTACCGCGACGAACTGAGCCAGAGCCAGCGCAAGGTACCCTGGCTCGGCGACATTCCCTATCTCGGC GCGCTGTTCCGCACTACCGCGGACACCGTGCGCCGCTCGGTGCGGCTGTTCCTCATCGAGCCGCGGCTGATCGACGATGG CGTCGGCCATTACCTGGCGCTGAACAACCGTCGCGACCTGCGCGGTGGCCTGCTTGAAGTCGACGAGTTGTCGAACCAGA GCCTGTCGTTGCGCAAGCTGCTCGGTAGCGCCCGTTGCCAGGCGCTGGCGCCGGCCAGGGCCGAACAGGAGCGCTTGCGC CAGGCCGGCCAGGGTTCGTTCCTCACGCCCTGCCGGATGGGTGCGCAGGAGGGCTGGCGGGTGACCGACAGCGCCTGTCC CAAGGACGGCGCCTGGTGCGTCGGCGCGGAGCGCGGGAATTAG Protein sequence : MRRLLIGGLLALLPGAVLRAQPLDWPSLPYDYVAQGESLRDVLANFGANYDASVIVSDKVNDQVSGRFDLESPQAFLQLM ASLYNLGWYYDGTVLYVFKTTEMQSRLVRLEQVGEAELKRALTAAGIWEPRFGWRADPSGRLVHVSGPGRYLELVEQTAQ VLEQQYTLRSEKTGDLSVEIFPLRYAVAEDRKIEYRDDEIEAPGIASILSRVLSDANVVAVGDEPGKLRPGPQSSHAVVQ AEPSLNAVVVRDHKDRLPMYRRLIEALDRPSARIEVGLSIIDINAENLAQLGVDWSAGIRLGNNKSIQIRTTGQDSEEGG GAGNGAVGSLVDSRGLDFLLAKVTLLQSQGQAQIGSRPTLLTQENTQAVLDQSETYYVRVTGERVAELKAITYGTMLKMT PRVVTLGDTPEISLSLHIEDGSQKPNSAGLDKIPTINRTVIDTIARVGHGQSLLIGGIYRDELSQSQRKVPWLGDIPYLG ALFRTTADTVRRSVRLFLIEPRLIDDGVGHYLALNNRRDLRGGLLEVDELSNQSLSLRKLLGSARCQALAPARAEQERLR QAGQGSFLTPCRMGAQEGWRVTDSACPKDGAWCVGAERGN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscC | AAO18033.1 | LscC | Virulence | TTSS locus | Protein | 0.0 | 67 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pscC | YP_791529.1 | Type III secretion outer membrane protein PscC precursor | VFG0211 | Protein | 0.0 | 99 |
| pscC | YP_791529.1 | Type III secretion outer membrane protein PscC precursor | VFG0402 | Protein | 0.0 | 64 |
