|
Name : pscD (PA14_42340) Accession : YP_791528.1 Strain : Pseudomonas aeruginosa UCBPP-PA14 Genome accession: NC_008463 Putative virulence/resistance : Virulence Product : type III export protein PscD Function : - COG functional category : - COG ID : - EC number : - Position : 3772204 - 3773502 bp Length : 1299 bp Strand : - Note : - DNA sequence : ATGGCCTGGAAGATCCGCTTCTACAGCGGGCTGAACCAGGGCGCCGAAGTCTCGCTCGGAGAGGGCCGGGTGGCGCTTGG CAGCGATCCGTTGCAGGCCGACCTGGTGTTGCTCGACGAGGGCATCGCGGCAGTCCACCTGGTGCTCGAGGTCGATGCCC AGGGCGTGCGCCTGCTGGAGTGGGCGGAGGGCTGCGAGCCTCGCCAGGACGGCCAGGCGCAAGTCGCCGGAGCGATCCTG CAGGCGCTTGCCGGGCAGACCTGCGGCCCGCTGCGCTGGGCATTCTGCGACCCGCAGCGGAGTTTTCCCGAGCGTTTCCC CGAAGTCGAGGCGCAGACCGCGCCAGTGCGCCGCAAGCCGTCCGCCCGTGCCGGCGGGGCCTGGCTGCTCGGCATCAGCC TGGCGCTGGCCCTGTGCCTGCTGGGCATGCTCGTCGAACCCTGGTCGGCCCGCCAGCACGGCATGGCCGGCGAGGAGCCC CTGGCGAGGGTGCGCGCCTACCTGCGCGAGCAGGGCATGAGCGAGGTGGATGTGCAGCGCCAGGGCGACAGTCTCCTGCT CGGCGGCTACCTGGAGGACAACGCCCGGCGCCTGGCGCTGCAGCGCTACCTCGATGGCAGCGGCGTGGACTACCGACTGG AAGCACGGAGCATGGAAGACATTCGCCAGGGCGTGGATTTCATCCTGCAGAAATTCGGCTATCGGCAGATCCTCAGCAGC AACGCGGACAAGCCTGGCTGGGTCCGGCTCAACGGCGAACTGGCGGAACAGGACGAACGCTGGGCGCGGATCGACGCATT GCTGGAGTCCGAGGTGCCGGGCCTGCTCGGGGTGGAAAACCAGGTCCGGGTGGCCGGCTCGCACCTGCGCCGCCTCGAAC GCCTGCTGGCGGACGCCGGCCTCGACCGGCAACTGAGTTTCCGCGAGCGCGGCGAGCGCATCGAGTTGAGCGGTACGCTC GACGAGGTCCAGCTCAGCGCCTTCTACCGCCTGCAGCGCGAGTTCCAGCAGGAGTTCGGCAACCGCCCGAGCCTGGAGCT GCTCAGTCGCGGCAAGCGCGCCAGCGGCGACGAACTGGAGTTCACGGTGCGCTCGGTGTCGCTGGGGCGGGTGCCCTATG TAGTGCTCGGCGACGGCCAGAAATACCCGGTGGGCGCCTCGACATCCCGTGGTGTGCGAATCCTCGCCATCGAGCCGGAG TCGATCCTGGTGGCCCGCGGCAAGCAGCGTTTCATCATCAATCTCAAAGGGGAGGTGCTCCATGATGACAGCCTTGGAAA CGCGACTGTCGGTCGCTGA Protein sequence : MAWKIRFYSGLNQGAEVSLGEGRVALGSDPLQADLVLLDEGIAAVHLVLEVDAQGVRLLEWAEGCEPRQDGQAQVAGAIL QALAGQTCGPLRWAFCDPQRSFPERFPEVEAQTAPVRRKPSARAGGAWLLGISLALALCLLGMLVEPWSARQHGMAGEEP LARVRAYLREQGMSEVDVQRQGDSLLLGGYLEDNARRLALQRYLDGSGVDYRLEARSMEDIRQGVDFILQKFGYRQILSS NADKPGWVRLNGELAEQDERWARIDALLESEVPGLLGVENQVRVAGSHLRRLERLLADAGLDRQLSFRERGERIELSGTL DEVQLSAFYRLQREFQQEFGNRPSLELLSRGKRASGDELEFTVRSVSLGRVPYVVLGDGQKYPVGASTSRGVRILAIEPE SILVARGKQRFIINLKGEVLHDDSLGNATVGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscD | AAO18032.1 | LscD | Virulence | TTSS locus | Protein | 7e-101 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pscD | YP_791528.1 | type III export protein PscD | VFG0212 | Protein | 0.0 | 99 |
| pscD | YP_791528.1 | type III export protein PscD | VFG0403 | Protein | 6e-77 | 43 |
