Gene Information

Name : pscL (PA14_42250)
Accession : YP_791520.1
Strain : Pseudomonas aeruginosa UCBPP-PA14
Genome accession: NC_008463
Putative virulence/resistance : Virulence
Product : type III secretion system protein
Function : -
COG functional category : N : Cell motility
COG ID : COG1317
EC number : -
Position : 3768667 - 3769311 bp
Length : 645 bp
Strand : -
Note : -

DNA sequence : 
ATGCTTCCATTTGTTGAACTAGACGCCAGTCGCGTACGGCTGGCCCCCGGGCAGGCCCTGTTGCGCGCCCGCGACTACCA
GGACTACCTCAGCGCCAACCGCCTGGTGGAAGCGGCACGCGAGCGTGCCGCGGAAATCGAGCGCGAGGCCCACGAGGTTT
ACCAGGAGCAGAAGCGCCTGGGCTGGGAGGCCGGACTGGAGGAGGCGCGTCTGCGCCAGGCCGGGCTGATCCAGGAAACG
CTACTGCGCTGCAATCGCTACTACCGGCAGGTCGATCGCCAGCTTGGCGAAGTGGTGCTGCAGGCGGTGCGCAAGGTGTT
GCGCCACTACGACGCTGTCGAGCTGACCCTGGCGGCCACGCGCGAGGCACTGGCATTGGTGAGCAACCAGAAGCAGGTGA
TCCTGCACGTCCAGCCGGAACAGCTGGTCGCGGTGCGCGAGCAGGTCGCCCGGGTGCTCAAGGATTTCCCCGAGGTGGGC
TACCTGGAAGTGGTCGGCGATGCCCGGCTGGACCAGGGCGGTTGCATCCTGGAAACCGAGATCGGGATCATCGACGCATC
GCTCGACAGCCAGTTGGCGGCGTTGCAGGCCGCATTGACGGAGGGCGTGGCGCGGAGCGGCGAGGAGGAAGGGGACGCCG
GTTGA

Protein sequence : 
MLPFVELDASRVRLAPGQALLRARDYQDYLSANRLVEAARERAAEIEREAHEVYQEQKRLGWEAGLEEARLRQAGLIQET
LLRCNRYYRQVDRQLGEVVLQAVRKVLRHYDAVELTLAATREALALVSNQKQVILHVQPEQLVAVREQVARVLKDFPEVG
YLEVVGDARLDQGGCILETEIGIIDASLDSQLAALQAALTEGVARSGEEEGDAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18079.1 LscL Not tested TTSS locus Protein 8e-45 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pscL YP_791520.1 type III secretion system protein VFG0220 Protein 1e-70 99
pscL YP_791520.1 type III secretion system protein VFG0411 Protein 1e-43 59
pscL YP_791520.1 type III secretion system protein VFG0049 Protein 1e-16 42