Gene Information

Name : lolD (PA14_25440)
Accession : YP_790186.1
Strain : Pseudomonas aeruginosa UCBPP-PA14
Genome accession: NC_008463
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2223532 - 2224215 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence : 
ATGAATGACAAGTCGGTGCTGAGTTGCCGCAACCTGAGCAAGAGCTACGACGAGGGGCCGCAATCGGTGCAGGTGCTGTC
CGGTGTCGAGTTGAACCTGCTGCCTGGGGAGCGGGTGGCTATCGTCGGCAGCTCCGGTTCGGGCAAGAGCACCTTGCTGA
ACATGCTCGGCGGCCTGGACACGCCCTCCGCCGGCAGCGTCTGGCTCGCCGGCGAGGAACTCTCGGCGCTGAACGAGACG
GCCCGCGGGCTGCTGCGCAACCGCGCGCTGGGCTTCGTCTACCAGTTCCACCACCTGTTGCCGGAGTTCACCGCCCTGGA
GAACGTCTGCATGCCGCTGTTGATCGGCCGCACGCCGATCACCGAAGCCCGCCAGCGGGCGGCCGAGCTGCTGGAGCGGG
TCGGGCTGGGGCATCGCCTGTCGCACAAGCCGGCCGAGCTGTCCGGCGGCGAGCGCCAGCGGGTGGCGATCGCCCGCGCG
CTGGTCAACCGTCCGCAGCTGGTACTGCTCGACGAGCCCACCGGCAACCTCGACCAGCATACCGCCCAGGGTATCCAGGA
GCTGATGCTGGAACTGAGCCGTTCGTTGCAGACCTCGTTCCTGGTGGTAACCCACGATCTCCAGCTGGCCGGGCACATGG
ATCGCATCCTGCGCCTGGAAGAAGGCCGACTGATCGCCGCGTAG

Protein sequence : 
MNDKSVLSCRNLSKSYDEGPQSVQVLSGVELNLLPGERVAIVGSSGSGKSTLLNMLGGLDTPSAGSVWLAGEELSALNET
ARGLLRNRALGFVYQFHHLLPEFTALENVCMPLLIGRTPITEARQRAAELLERVGLGHRLSHKPAELSGGERQRVAIARA
LVNRPQLVLLDEPTGNLDQHTAQGIQELMLELSRSLQTSFLVVTHDLQLAGHMDRILRLEEGRLIAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-30 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-30 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_790186.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 4e-39 44
lolD YP_790186.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 3e-33 44