Gene Information

Name : RPE_0521 (RPE_0521)
Accession : YP_779460.1
Strain : Rhodopseudomonas palustris BisA53
Genome accession: NC_008435
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 569743 - 570426 bp
Length : 684 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_0080 ABC transporter related

DNA sequence :
ATGCACGGTAACCGCGCCGATCTTGCGCAGATGCTCAGCGTCCGTGGCTTGAGCAAATCCTATCGCTCCGGGCCCGATCG
CATCAGCGTGCTGCGCGGCGTCGACCTCACCGTCAGCGCCGGCGAGAGCGTGGCGCTGACCGGCGAATCCGGCAGCGGCA
AGAGCACGCTGCTGCACTTGATCGCGGGTCTGGACCAGGCCGATTCCGGCGAGGTGCAATTCGGCGACACCGTGATCACC
GCGCTGCCCGATGCCGGCCGCGCCGCGTTTCGCCGCGACCGGCTCGGGCTGGTGTTCCAGCAATTCAATCTGATCCCGAG
CCTGACGGTGGCCGACAACCTCGCCTTCCAAGCCAAGATCGCCGATCGTTTTGACGCCAAATGGCAGGTTGAACTGATCG
AGCGGCTGGGGCTCGGCGCCTTGACCAGGCGCTATCCGGAGCAACTGTCCGGCGGCCAGCAGCAGCGCGTCGCGATCGGC
CGGGCGCTGGCGGTGAAGCCGTTGTTGCTGCTCGCCGACGAGCCGACCGGCAATCTCGACGAGGCCACCGCCGACGAGGT
GATGGGGCTGGCGCGCGATCTGATCAGCCGCAGCGGCTGCGGTTTTCTGATGGTGACGCATAGCGAGCGGCTGGCTTTGA
TGCTGGATCGCCGCGTGCATCTGCACGCGGGGCTGATCGCGTGA

Protein sequence :
MHGNRADLAQMLSVRGLSKSYRSGPDRISVLRGVDLTVSAGESVALTGESGSGKSTLLHLIAGLDQADSGEVQFGDTVIT
ALPDAGRAAFRRDRLGLVFQQFNLIPSLTVADNLAFQAKIADRFDAKWQVELIERLGLGALTRRYPEQLSGGQQQRVAIG
RALAVKPLLLLADEPTGNLDEATADEVMGLARDLISRSGCGFLMVTHSERLALMLDRRVHLHAGLIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-36 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-36 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-36 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPE_0521 YP_779460.1 ABC transporter-like protein CP001581.1.gene798.p Protein 3e-36 43