Gene Information

Name : RPE_4899 (RPE_4899)
Accession : YP_783798.1
Strain : Rhodopseudomonas palustris BisA53
Genome accession: NC_008435
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 5484278 - 5484943 bp
Length : 666 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpc:RPC_4932 two component transcriptional regulator, winged helix family

DNA sequence : 
ATGCGGGTGCTGGTGGTCGAAGACGATCGGCGGATCGCCGCGGATCTGACCCGGGGGCTGGAAGCCGCCGGCTACGTCGT
CGAGGTGGTTGGCGACGGCGAGGAGGCGTGGTTTCGCGGCGACACCGAGGACTATGCCGCGATCATTCTCGATCTCGGGC
TGCCCGGCATGGATGGGCTGACGGTGCTGAAGCGCTGGCGCTCCAATGATCGACGCATCCCGGTGCTGATCCTGACCGCG
CGCGGCAGCTGGGCCGAGCGGGTCGACGGCATCGACGCCGGCGCCGACGACTATCTGCCAAAACCGTTCCGGATGGAGGA
GCTGCTGGCACGGCTGCGCTCGATCGTGCGCCGTTCGGTCGGCCAGGCCTCGTCGCTGATTCATGTCGGCGAGATCAGCA
TCGACGAGCGGCAGATGCGGGTCGATCGGCGCGGCGTGCCGGTCAATCTGTCGCCGCTGGAATACCGGCTGGTGTCCTAT
CTGGCGCTGCATCGCGGCCGGGTGGTGTCGCAGCACGAGCTCAGCGAGAACATCTACGGCAATGAGGACGCGCACGATTC
CAACGCCATCGAGGTGCTGATCGGCCGGGTACGCAAAAAGCTCGGCAGCGAATTGATCGAGACCCGCCGCGGCTTCGGCT
ACATCGTGCCGGGCGCGGCGGAATGA

Protein sequence : 
MRVLVVEDDRRIAADLTRGLEAAGYVVEVVGDGEEAWFRGDTEDYAAIILDLGLPGMDGLTVLKRWRSNDRRIPVLILTA
RGSWAERVDGIDAGADDYLPKPFRMEELLARLRSIVRRSVGQASSLIHVGEISIDERQMRVDRRGVPVNLSPLEYRLVSY
LALHRGRVVSQHELSENIYGNEDAHDSNAIEVLIGRVRKKLGSELIETRRGFGYIVPGAAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-25 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPE_4899 YP_783798.1 two component transcriptional regulator BAC0487 Protein 6e-32 45
RPE_4899 YP_783798.1 two component transcriptional regulator NC_002516.2.879194.p Protein 4e-34 43
RPE_4899 YP_783798.1 two component transcriptional regulator CP000647.1.gene1136. Protein 2e-32 42
RPE_4899 YP_783798.1 two component transcriptional regulator BAC0530 Protein 2e-32 42
RPE_4899 YP_783798.1 two component transcriptional regulator BAC0125 Protein 1e-24 41
RPE_4899 YP_783798.1 two component transcriptional regulator CP000034.1.gene2022. Protein 7e-32 41
RPE_4899 YP_783798.1 two component transcriptional regulator NC_002695.1.913289.p Protein 3e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPE_4899 YP_783798.1 two component transcriptional regulator VFG0473 Protein 1e-28 42