Gene Information

Name : RPE_3916 (RPE_3916)
Accession : YP_782822.1
Strain : Rhodopseudomonas palustris BisA53
Genome accession: NC_008435
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 4382591 - 4383352 bp
Length : 762 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; Insect alcohol dehydrogenase family; KEGG: rpc:RPC_3793 short-chain dehydrogenase/reductase SDR

DNA sequence :
ATGTCCGGCATATTCGACGTCAGTAAAGAAACCATCCTCATCACCGGCGCCTCGCAGGGGCTGGGGCGGCAATTCGCCCG
CGTGCTGTCCGCCCATGGCGCCGCGGTGGCGCTGGCGGCGCGCCAGGTCGACAAGCTGAACAGCCTGCAGGCGGAGATCA
CCACGGCCGGCGGTCGGGCCGCTACGGTGCGGATGGACGTCACCGACTTGGCCTCGATCGCGCAGGCGATCGACGAGGCC
GAAGCCGCGCTCGGCCCGTTGACGGTGCTGATCAACAATGCCGGAATCGCCGTGGAAAAGCTCGCAATCGAGCAGACCGA
GGCCGACTGGGACGCGGTGATCGGCGCCAATCTCAAGGGCGCCTATTTCGCCGCCACCGAAATGGCGCGGCGGATGGTCG
AGCGCCAACAGGGCGGCAACATCGTCAACATCGCTTCCGTGCTGGGCTTCGGGGTGATGAAATTCCTGTCGCCCTACGCC
ATCTCCAAGGCCGGCATCGTGCAGGCCACCAAAGCGCTGGCGCTGGAATGGGCCGGGCAGGGCATCCGCGTCAACGCCTT
GGCGCCGGGCTATATCGATACCGACATGAACCACGAAGTCTGGGCGACGCCGGCCGGCGAGAAACTGGCAAGACGGATTC
CGCAGCGCCGGATCGGCACCGAGGCCGATCTCGACGGCGCGATATTGCTGCTGGCGTCGAATGCGTCGCGCTACATGACG
GGGAGTGTCGTGACGGTCGACGGCGGGTATTTGTTGACGTAG

Protein sequence :
MSGIFDVSKETILITGASQGLGRQFARVLSAHGAAVALAARQVDKLNSLQAEITTAGGRAATVRMDVTDLASIAQAIDEA
EAALGPLTVLINNAGIAVEKLAIEQTEADWDAVIGANLKGAYFAATEMARRMVERQQGGNIVNIASVLGFGVMKFLSPYA
ISKAGIVQATKALALEWAGQGIRVNALAPGYIDTDMNHEVWATPAGEKLARRIPQRRIGTEADLDGAILLLASNASRYMT
GSVVTVDGGYLLT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01499.1 2-deoxy-D-gluconate 3-dehydrogenase Not tested PAGI-1 Protein 9e-37 48