Gene Information

Name : RPE_0392 (RPE_0392)
Accession : YP_779331.1
Strain : Rhodopseudomonas palustris BisA53
Genome accession: NC_008435
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 434273 - 434938 bp
Length : 666 bp
Strand : +
Note : TIGRFAM: Protein of unknown function UPF0001; PFAM: alanine racemase domain protein; KEGG: rpd:RPD_0438 protein of unknown function UPF0001

DNA sequence :
ATGAACGACGCTGTTGCCACCGGGCTCTCTGCGGTTGAACGGGCGATCGCACGGGCCTGCGCCGATGCCAGGCGCGACCG
CGGCGAGGTGAGCTTGATCGCGGTGTCGAAGACCTTTCCGGCCGAGGCGATCGTCCCGGTGCTGCAGGCGGGGCAGCGCG
CCTTCGGCGAGAACCGGGTGCAGGAGGCCAAGGCGAAATGGCCGGCGCTGCGGCAATCATACCCGGACACCGTCCTGCAC
CTGATCGGGCCGTTGCAGTCCAACAAGGCCAAGGACGCGGCGGCGCTGTTCGACGCCATCCATTCGGTCGACCGCGACAG
CCTAGCCCAAGCGCTGGCGAAGGAATTGCCGTTGCACAACAGGCTCATCGAGCTGTTCGTGCAGCTCAATACCGGCGAGG
AGCCGCAGAAGGCGGGGGTGGCGCCGGCCGAGGCCGACGATTTTCTCAAACGCTGCCGCGAGCATCATGGGTTGGAAATT
GCCGGCCTGATGTGCATCCCGCCGGTCGACGAGGCGCCGGCGCCGCATTTTGCGCTGACCGCCAAGATCGCCAAGCGCAA
CGGCCTGACGAAGCTGTCGATGGGCATGAGCGCCGATTTCGCCACCGCGATTCAGTTCGGCGCCACCCACATCCGGGTCG
GCTCGGCGATTTTCGGACACCGCTAG

Protein sequence :
MNDAVATGLSAVERAIARACADARRDRGEVSLIAVSKTFPAEAIVPVLQAGQRAFGENRVQEAKAKWPALRQSYPDTVLH
LIGPLQSNKAKDAAALFDAIHSVDRDSLAQALAKELPLHNRLIELFVQLNTGEEPQKAGVAPAEADDFLKRCREHHGLEI
AGLMCIPPVDEAPAPHFALTAKIAKRNGLTKLSMGMSADFATAIQFGATHIRVGSAIFGHR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 5e-23 41
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 5e-23 41
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 5e-23 41
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 5e-23 41