Gene Information

Name : RPE_3857 (RPE_3857)
Accession : YP_782764.1
Strain : Rhodopseudomonas palustris BisA53
Genome accession: NC_008435
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 4312342 - 4313064 bp
Length : 723 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpa:RPA0131 putative sulfonate transport system ATP-binding protein

DNA sequence : 
ATGAGCGAGGCCGTGCTGCGCTTCGACAACGTGAACTTCGCCTATGACGGCGCGCCGGTGCTCGATGGCATCGACCTCGC
GATCCCGGCGGGAACGGTCACGGCCCTGATGGGCCCCTCGGGATGCGGCAAGAGTACGCTGGTCGCGCTGGCCGCTGGGC
TGCTGACCCCGAATGCGGGACGGGTCGAGCGTCGCAGCCAGCGTCTCGGAATCGTGTTCCAGGATCCGGCGCTGCTGCCC
TGGCGAACGGCGCTCGACAACGTCGCCTTCGCTTTGATCGCGCTCGGGCTGCCGCGCGCCGAACGCCGCGCGCGCGCGGG
CGACATGCTCGCCGCCGTCGGTCTGTCGGCCGATATGGACAAGTACCCGCGCGAACTGTCGGGCGGGATGCGCCAGCGTG
TGGCCCTTGCCCGCGCCTTGGTCATCGAACCCGACCTTCTGTTGTGCGACGAGCCCTTCAGCGCGCTCGACGCCCTGGTG
CGCAACGATCTGCAGCAGCGCTTGCGCGATATCCACCATCGCACCGGCCTCACCACCGTCGTCGTGACCCACGACGGCAA
CGAGGCCAGTGAGTGCGACCTCGTCGTCATCATGTCGAAGGGACGGATCGAACAGGCCGCCCCACCGGCCGAGATCCGCG
CCACGCCCGCCGGCGATTTCGTGCGCACGTTCACCGCGGCATGCCGAATCGAGCCGGAAGCCGGTGGCGTGCGAAAGATC
TGA

Protein sequence : 
MSEAVLRFDNVNFAYDGAPVLDGIDLAIPAGTVTALMGPSGCGKSTLVALAAGLLTPNAGRVERRSQRLGIVFQDPALLP
WRTALDNVAFALIALGLPRAERRARAGDMLAAVGLSADMDKYPRELSGGMRQRVALARALVIEPDLLLCDEPFSALDALV
RNDLQQRLRDIHHRTGLTTVVVTHDGNEASECDLVVIMSKGRIEQAAPPAEIRATPAGDFVRTFTAACRIEPEAGGVRKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 5e-33 51
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-31 41
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPE_3857 YP_782764.1 ABC transporter-like protein NC_008702.1.4606598. Protein 2e-19 41