Name : RPE_3542 (RPE_3542) Accession : YP_782452.1 Strain : Rhodopseudomonas palustris BisA53 Genome accession: NC_008435 Putative virulence/resistance : Resistance Product : Beta-lactamase Function : - COG functional category : V : Defense mechanisms COG ID : COG2602 EC number : 3.5.2.6 Position : 3962410 - 3963228 bp Length : 819 bp Strand : - Note : PFAM: penicillin-binding protein, transpeptidase; KEGG: rpc:RPC_3398 beta-lactamase DNA sequence : GTGATCGATCGCCGCAAAATTCTGCAACTACTCGCCATCGCAGGGCTTGCGCCGACGTCGGCCCTGGCCGAAGTGGCGCC GCCGCGCAGCGAGATTCGTGCATCACTCGCCAAGCGTTTTGCCGACGCCGGCACCCAAGGCACTTTTGTCGGCTACAAGA CCGACGACTATCTGATCATCGCCAGCGACACCGAGCGTTCGGGGCAGGGGTTCTTGCCGGCCTCGACCTTCAAGATTCCG AATTCGCTGATCGCGCTGGAAACCGGGGTGGTCGCGGATCCCGACAAGGACGTGTTCAAGTGGGACGGCGTCAGCCGCGA CTTCCCCGGATGGAATCAGGATCACACGCTACGCTCGGCGATCGCGGTCTCCGCGGTGCCGGTCTATCAGGAGATCGCGC GGCGGATCGGGCCGCAGCGCATGCAGCAATATCTCGATCTGTTCGACTACGGCAATCGCGCCATCGGCGGCGGCATCGAC CAGTTCTGGCTCACCGGCGCGTTGCGGATCGACCCGATCCAGCAGATCGATTTCCTCGACCGGCTGCGCCGCGGCGCGCT GCCGATCTCGGCGCGCAGCCAGCAGCTGGTGCGCGACATCCTGCCGGTGACGAAAGTCGGCGACGCGGTCATCCGCGCCA AGACCGGGCTGTTGGGCGCCGAAACCGGCAAGCCGACGCTCGGCTGGCTGGTCGGCTGGGCCGAGAAGGGCGAGGCACGG ACCGTGTTCGCGCTCAATTGCGACATCCGCGAGCCGAGCCACGTGGCGGCGCGGATGATTTTGGCGCAGCAATGCCTCGG CGATATCGGCGCGCTCTGA Protein sequence : MIDRRKILQLLAIAGLAPTSALAEVAPPRSEIRASLAKRFADAGTQGTFVGYKTDDYLIIASDTERSGQGFLPASTFKIP NSLIALETGVVADPDKDVFKWDGVSRDFPGWNQDHTLRSAIAVSAVPVYQEIARRIGPQRMQQYLDLFDYGNRAIGGGID QFWLTGALRIDPIQQIDFLDRLRRGALPISARSQQLVRDILPVTKVGDAVIRAKTGLLGAETGKPTLGWLVGWAEKGEAR TVFALNCDIREPSHVAARMILAQQCLGDIGAL |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
blaOXA-129 | AET25386.1 | OXA-129 beta-lactamase | Not tested | PAGI-2(C) | Protein | 1e-48 | 44 |
bla OXA-129 | AFG30109.1 | OXA-129 beta-lactamase | Not tested | PAGI-2 | Protein | 1e-48 | 44 |
bla OXA-10 | CAJ77047.1 | Oxacillinase | Not tested | AbaR1 | Protein | 2e-45 | 42 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
RPE_3542 | YP_782452.1 | Beta-lactamase | AM932669.1.gene2.p01 | Protein | 7e-49 | 44 |
RPE_3542 | YP_782452.1 | Beta-lactamase | X58272.1.gene1.p01 | Protein | 4e-48 | 43 |
RPE_3542 | YP_782452.1 | Beta-lactamase | JN205800.1.gene6.p01 | Protein | 7e-46 | 42 |
RPE_3542 | YP_782452.1 | Beta-lactamase | HM015773.1.gene6.p01 | Protein | 1e-45 | 42 |
RPE_3542 | YP_782452.1 | Beta-lactamase | NC_010410.6002874.p0 | Protein | 1e-45 | 42 |
RPE_3542 | YP_782452.1 | Beta-lactamase | U37105.2.gene2.p01 | Protein | 1e-45 | 42 |
RPE_3542 | YP_782452.1 | Beta-lactamase | AY343493.1.gene1.p01 | Protein | 1e-41 | 42 |
RPE_3542 | YP_782452.1 | Beta-lactamase | HQ700343.1.gene1.p01 | Protein | 7e-45 | 41 |
RPE_3542 | YP_782452.1 | Beta-lactamase | AY500137.1.gene1.p01 | Protein | 4e-46 | 41 |
RPE_3542 | YP_782452.1 | Beta-lactamase | AJ854182.1.gene1.p01 | Protein | 3e-45 | 41 |
RPE_3542 | YP_782452.1 | Beta-lactamase | U59183.1.gene3.p01 | Protein | 9e-46 | 41 |
RPE_3542 | YP_782452.1 | Beta-lactamase | Z22590.1.gene1.p01 | Protein | 4e-45 | 41 |
RPE_3542 | YP_782452.1 | Beta-lactamase | AF231133.1.gene3.p01 | Protein | 3e-43 | 41 |