Gene Information

Name : rph (RPE_0353)
Accession : YP_779292.1
Strain : Rhodopseudomonas palustris BisA53
Genome accession: NC_008435
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 392033 - 392764 bp
Length : 732 bp
Strand : +
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGACCGGAGGATATCCCATGCGGCCGAGCCGACGTGCGCCGGACGAATTGCGCGCCGTGTCGCTGGAGCGCGGCGTGGT
GAAATATGCCGAAGGCTCCTGCCTGGTGAAATTCGGCGATACCCATGTCCTGGTCACCGCCTCGCTGGAAGAGCGGCTGC
CGCCCTGGCTGAAGGGCCAGGGCCGCGGCTGGGTCACGGCCGAATACGGCATGCTGCCGCGCGCCACCCATGAGCGCACC
CGCCGCGAGTCGGCCGCCGGCAAGCAGAGCGGGCGCACCGTGGAAATCCAGCGCCTGATCGGCCGTTCGCTGCGCGCTTC
CGTCGATCTCGAAGCGATGGGCGAACGCCAGATCACCGTCGATTGCGACGTGCTGCAGGCCGATGGCGGCACCCGCACCG
CCGCGATCACCGGCGCCTGGGTGGCGCTGGCCGATTGCCTGGCCTGGATGAAGGCGCGCAACATGATCAAGGCCAAGGTC
TTGCGCGACAACGTCGCGGCGATCTCCTGCGGCATCTACAACGGCACCCCGGTGCTCGATCTCGACTATGCCGAGGATTC
CGAGGCCGAAACCGACGCCAATTTCGTCATGACCGGCGATGGCCGGATCATCGAGGTGCAGGGCACCGCGGAGAAGACCC
CGTTCTCGCAGGACGAATTCTTGGCGCTGATGGCGCTGGCGCAGAAGGGCGTGGCGCGGCTGGTCGATCTGCAGAACATG
GCGGTGGCGTGA

Protein sequence :
MTGGYPMRPSRRAPDELRAVSLERGVVKYAEGSCLVKFGDTHVLVTASLEERLPPWLKGQGRGWVTAEYGMLPRATHERT
RRESAAGKQSGRTVEIQRLIGRSLRASVDLEAMGERQITVDCDVLQADGGTRTAAITGAWVALADCLAWMKARNMIKAKV
LRDNVAAISCGIYNGTPVLDLDYAEDSEAETDANFVMTGDGRIIEVQGTAEKTPFSQDEFLALMALAQKGVARLVDLQNM
AVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 6e-53 52