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Name : RPE_3442 (RPE_3442) Accession : YP_782354.1 Strain : Rhodopseudomonas palustris BisA53 Genome accession: NC_008435 Putative virulence/resistance : Unknown Product : deoxyribodipyrimidine photolyase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0415 EC number : 4.1.99.3 Position : 3836219 - 3837670 bp Length : 1452 bp Strand : + Note : PFAM: DNA photolyase, FAD-binding; DNA photolyase domain protein; KEGG: rpc:RPC_3356 deoxyribodipyrimidine photolyase DNA sequence : ATGGCCATCTCCCCGCCTCGCCCGTCGCTGGTCTGGTTTCGCGATGACCTGCGGCTCTCCGACCACCCGGCGCTGAACGC GGCAGCGAGCAGCGGCCGACCTGTGCTCTGCCTCTACGTGCTCGACGAGCAAAGCCCAGGGGGCCGGCCGTTGGGCGGCG CGGCGCGCTGGTGGCTGGCGCAATCGCTGCGCAGCCTGCAGCAGATCCTCAGCGAACGCGGCGCCACGCTTATGCTGCGA CGCGGCGCGGCCGCTCAGGTCGTCGCGGGGCTGGCGCGCGAGACCAACGCCGAGGTGGTATATTACAATGACATCGCCAT GGCCCCGGCGCGCACCGTCGCCGCTGAACTGGCAGCGACGCTCGCCGACCATGGCATCGCCGTCCACCAACACCCTGGCG ATCTGCTGGCGGCGCCCGAGACCATCCGCACCAAGGAGGGTCGCGGCCTCAGAGTGTTCACACCATTCTGGAAGCGCGTG CTGTCGCTCGGCGATCCGGCAAAGCCGCTCCCCGCCCCGACCGCGCTCGGCCCCCCGCCCGCGGCGGCCAGCGATCGGCT CGACGATTGGGCACTGGAACCGACCGCGCCGGACTGGGCGGGCGGTCTGCGCGCAGCCTGGCAACCGGGCGAAGCAGCGG CGCAGCGGGCGTTGACGGACTTCCTCACCACCGGGATCGCGGGCTACGCCGGCGATCGCGACCGCCCCGACCGACCCGGC ACTTCGTTGCTGTCGCCGCATTTGCGGTTCGGCGAAATCGGCCCGCGCCAGATTTGGCACGCGGCGCGGTTTGCCGCCGC CGCACGGCCCGCGATCGCCGGGGACGTCGACAAGTTTCTCAGCGAACTCGGCTGGCGCGAATTCTGCCGGCACCTTTTGT TCGATCATTCCGACCTCGCCACCCGCAATCTGCAGCCGGCGTTCGACGCCTTCCCGTGGGTCGAAGATCCGGCCGGGCTG CGCGCCTGGCAGCGCGGGCTCACCGGCTATCCGATCGTCGACGCCGGAATGCGGCAACTGTGGCAGACCGGGGTGATGCA CAACCGGGTGCGGATGGTAGTGGCCTCGTTCCTGGTCAAGCATTTGCTGATCGACTGGCGCTGCGGCGAGCAATGGTTCT GGGACACGCTGGTCGATGCCGACGCCGGCAGTAACCCGGGCAATTGGCAATGGGTCGCCGGCTGCGGCGCCGACGCCGCG CCCTATTTCCGGGTGTTCAATCCGATCCTGCAGGGCGAAAAATTCGATCCCGACGGCGCTTACGTTCGCCGCTTCGTGCC CGAACTGGCGCGGCTGCCGGCGGCCTTGATCCATCAGCCATGGACCGCGACGCCGTTGGAACTCGCTTCCGCCGGCGTTC AGTTGGGGCACAACTATCCCGAACCGATCATCGAGCATCGACGCGGCCGCGAACGCGCGCTCGCGGCCTACGCAACTGTG CGCAAAACTTGA Protein sequence : MAISPPRPSLVWFRDDLRLSDHPALNAAASSGRPVLCLYVLDEQSPGGRPLGGAARWWLAQSLRSLQQILSERGATLMLR RGAAAQVVAGLARETNAEVVYYNDIAMAPARTVAAELAATLADHGIAVHQHPGDLLAAPETIRTKEGRGLRVFTPFWKRV LSLGDPAKPLPAPTALGPPPAAASDRLDDWALEPTAPDWAGGLRAAWQPGEAAAQRALTDFLTTGIAGYAGDRDRPDRPG TSLLSPHLRFGEIGPRQIWHAARFAAAARPAIAGDVDKFLSELGWREFCRHLLFDHSDLATRNLQPAFDAFPWVEDPAGL RAWQRGLTGYPIVDAGMRQLWQTGVMHNRVRMVVASFLVKHLLIDWRCGEQWFWDTLVDADAGSNPGNWQWVAGCGADAA PYFRVFNPILQGEKFDPDGAYVRRFVPELARLPAALIHQPWTATPLELASAGVQLGHNYPEPIIEHRRGRERALAAYATV RKT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CD241_0111 | YP_005124380.1 | putative riboflavin biosynthesis protein | Not tested | Not named | Protein | 3e-72 | 42 |
| DIP0113 | NP_938509.1 | riboflavin biosynthesis protein | Not tested | Not named | Protein | 2e-71 | 41 |
