Gene Information

Name : RPE_2839 (RPE_2839)
Accession : YP_781756.1
Strain : Rhodopseudomonas palustris BisA53
Genome accession: NC_008435
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 3185380 - 3186210 bp
Length : 831 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sil:SPO3365 zinc/manganese/iron ABC transporter, ATP-binding protein

DNA sequence : 
ATGACCGCTGCGCCTCAACTCGTGGCCCGCGACGGCCGCACGCTCGCCGCCGACCAACCCGACAGCCCGCTGGCGGTTGC
CGGCCTGACCGTGTCCTATGGCGAGAAGCCGGTGCTGTTCTCCGTCGATTTCGTCACCCCGCCCGGCGCGATGCTTGCGA
TCGTCGGTCCCAACGGCGCCGGCAAATCGACGCTGATCAAGGCCGCGCTCGGAATCGTGCCGCGTATCAGCGGCGACGTC
ACCGTGTTCGGCCGCCGCTACGCCAAGGCGCGCCATCGCATCGCCTATGTGCCGCAGCGCGCCAGCGTCGACTGGGATTT
TCCCGCGACCGCGCGCGACGTGGTGCTGATGGGGCTGTATCGCGACATCGGCTTTCTGCGGTTTGCCGGCAAGACGCATC
GCCAGCGGGCGATCGAATGCCTGGAGCGGGTCGGAATGGCCGGCTTTGCCGATCGGCAGATCGGTCAACTCTCCGGCGGT
CAGCAGCAGCGCATCTTTCTGGCGCGAGCGCTGGCGCAAGAAGCCGACCTCTACATCATGGACGAGCCGTTCGCCGGCGT
CGACGCCGCCACCGAACGCGCCATCGTGGCGGTGCTGAAGGCGCTGAACGCCACCGGCAAGACCATCATCTGCGTGCATC
ACGATCTTGCAACCGTCGCGGACTATTTCGACCGCGTGCTGCTGATCAACGGCCGCAAGATCGCCGACGGTCCGATCGCG
ACCGCGTTCACGGCGGAGAATCTGCAGGCCACCTATGGCGGACGCCTGGTCGCGACACAGGTCGAGGAGCTGGCGGCGTC
GAAGCCGGCACCGTCGTTTGCCGCTTCCTGA

Protein sequence : 
MTAAPQLVARDGRTLAADQPDSPLAVAGLTVSYGEKPVLFSVDFVTPPGAMLAIVGPNGAGKSTLIKAALGIVPRISGDV
TVFGRRYAKARHRIAYVPQRASVDWDFPATARDVVLMGLYRDIGFLRFAGKTHRQRAIECLERVGMAGFADRQIGQLSGG
QQQRIFLARALAQEADLYIMDEPFAGVDAATERAIVAVLKALNATGKTIICVHHDLATVADYFDRVLLINGRKIADGPIA
TAFTAENLQATYGGRLVATQVEELAASKPAPSFAAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 9e-44 43
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 1e-43 42
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 1e-43 42
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-43 42
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 1e-43 42
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 9e-43 42
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 9e-43 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPE_2839 YP_781756.1 ABC transporter-like protein BAC0400 Protein 1e-69 61
RPE_2839 YP_781756.1 ABC transporter-like protein BAC0440 Protein 2e-47 43
RPE_2839 YP_781756.1 ABC transporter-like protein BAC0350 Protein 7e-44 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPE_2839 YP_781756.1 ABC transporter-like protein VFG0526 Protein 6e-44 42