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Name : RPE_2700 (RPE_2700) Accession : YP_781617.1 Strain : Rhodopseudomonas palustris BisA53 Genome accession: NC_008435 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 3021753 - 3023183 bp Length : 1431 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCACGACATCAAATCGATCCGCGACAATCCGCAGGCGTTCGACGCTGCGTTCACAAGGCGCGGGCTGGCGCCGATCGC GGACAGCCTGATCAAGCTCGACGAGACCCGGCGCATCGCGATCATCGCCTCGGAGCAGGCGCAGGCGCGGCGCAATGCGG CGTCGAAAGAGATCGGCGAGGCCAAGAAGGCCAAGGACAACGCCCGCGCCGAGGCGCTGATGGCCGAGGTCACCGAGCTG AAAACCACGATGCCGGCGCTGGACGAGGCGGTGAAGGCGGCCGACGCGGCGCTGAAGAAGGCGCTGTCGGAAATCCCGAA CCTGCCGCTGGCCGAAGTGCCGCAGGGCGCCGACGAACACGGCAATGTGGTGCGCAGCCATTTTGGCGCGCCGCGCAGCT ACGCGTTCACGCCAAAGCCGCATTACGAACTCGGCGAAGCGCTCGGCCAGATGGATTTCGAAGCCGCCGCGAAAATGTCG GGCGCGCGTTTCGTGGTGCTGAAGAAGGGCCTGGCGCGGCTGGAGCGCGCGATCGGGCAGTTCTTCCTCGACGTCCACAC CGGCGAGCACGGCTACACCGAAGTGAATCCGCCGTTGCTGGTCAAAGACGATGCGATGTTCGGCACGGCGCAGTTGCCGA AGTTTAGCAATGACCAATTCCGGGTCGATACCGAAGAGATTCAAATCAAGAGTGCCTACGAAGAGTTTGAGAAGGCGAAA AACGCAATCCTGAACTACGTGGAAGAGGCAGGGATCAAGTCTGCCCGAGAGGAGAAGCTCGAAGTTCTAGGATTCGCTTA CGAACCCAATCCGGATCGTCGCTGGCTCATCCCCACCGCCGAAGTGTCCCTCACAAATCTCGTCCGCGAATCCATCCTCG ACGAAAAAGAACTGCCGATGCGGCTGACCGCGTTGACGCCGTGTTTCCGCGCCGAGGCCGGCGCGGCCGGGCGCGATACG CGGGGCATGATCCGGCAGCATCAGTTCACCAAGGTCGAGCTGGTGTCGATCACCACGCCGGAGCAATCCAAGGACGAGCA CGAGCGGATGCTGGCTTGCGCCGAGGAGGTGCTGCGCCGGCTCGGGCTGCACTATCGCGTCATGACGCTGTGCACCGGCG ACATGGGCTTTGCCTCGCAAAAAACCTACGACATCGAAGTCTGGATGCCGGGGCAAGGCGAGGGCGGCGCCTATCGCGAG ATTTCGTCGTGCTCGGTGTGCGGCGATTTCCAGGCGCGGCGGATGGATGCGCGCTCGCGCGGGCCGGACGGCAAGCCGCG CTTCGTCCACACGCTGAACGGCTCGGGGACGGCGGTCGGCCGCGCGCTGATCGCGGTGATCGAGAATTATCAGCAGGAAG ACGGCTCGATCGCGGTGCCCGACGCGCTGCTGCCCTATATGGGCGGGCTCAAGGTGATTGCAAACAGTTAG Protein sequence : MHDIKSIRDNPQAFDAAFTRRGLAPIADSLIKLDETRRIAIIASEQAQARRNAASKEIGEAKKAKDNARAEALMAEVTEL KTTMPALDEAVKAADAALKKALSEIPNLPLAEVPQGADEHGNVVRSHFGAPRSYAFTPKPHYELGEALGQMDFEAAAKMS GARFVVLKKGLARLERAIGQFFLDVHTGEHGYTEVNPPLLVKDDAMFGTAQLPKFSNDQFRVDTEEIQIKSAYEEFEKAK NAILNYVEEAGIKSAREEKLEVLGFAYEPNPDRRWLIPTAEVSLTNLVRESILDEKELPMRLTALTPCFRAEAGAAGRDT RGMIRQHQFTKVELVSITTPEQSKDEHERMLACAEEVLRRLGLHYRVMTLCTGDMGFASQKTYDIEVWMPGQGEGGAYRE ISSCSVCGDFQARRMDARSRGPDGKPRFVHTLNGSGTAVGRALIAVIENYQQEDGSIAVPDALLPYMGGLKVIANS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-84 | 47 |
