Gene Information

Name : RPE_2260 (RPE_2260)
Accession : YP_781182.1
Strain : Rhodopseudomonas palustris BisA53
Genome accession: NC_008435
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 2502231 - 2503661 bp
Length : 1431 bp
Strand : +
Note : PFAM: aldehyde dehydrogenase; KEGG: rpd:RPD_2215 aldehyde dehydrogenase

DNA sequence :
ATGGTCAATCGCCTGCAGTTCTACATCGATGGCGCCTGGGTCGATCCCGCTGTCACAAAGTCGACGCCGGTGGTGAATCC
GGCGACCGAGGAAGCGATGTATGAAGTGGCATTGGGCTCCAAGGCCGACGTCGACAAGGCGGTCGCGGCCGCCAAGCGCG
CCTTCGAGACCTTCTCGCAGACCAGCCGCGAGGAGCGGGTGGCGCTCTTGGAAAAGATCATCGCGGTCTACAAGACGCGG
ATGAAGGACATCGGTGCCGCGGTGTCCGACGAGATGGGCGCGCCGCTGCCTTTCGCGGAAAAATTCCAGGCCGGCGCCGG
CCTCGGCCATATCCTGTCGACGCTCGAGGTGTTGAAGAACTACGCCTTCGAGGAGCCGATGGGCTCGGCGATGATCGTGC
GCGAGCCGGTCGGCGTGATCGGGATGATCACGCCGTGGAATTGGCCGCTCAACCAGATCGCTTGCAAGGTCGCGCCCGCG
CTTGCCGCGGGCTGCACCATGATCCTGAAGCCGAGCGAATTCACGCCGTCGTCGGCGCTGATCTTTGCCGAAATTTTGCA
TGAAGCCGGCGTGCCGAAGGGCGTGTTCAATCTGATCAACGGCCTCGGCCCCGAAGTCGGTGCCGCGATGAGCGAGCATC
CCGACATCGACATGATCTCCTTCACCGGCTCGACCCGCGCCGGCATCGACGTCGCCAAGCGTGCCGCGCCGACCGTGAAG
CGCGTTAGCCAGGAACTCGGCGGCAAGTCGCCCAACATCATTCTCGAAGACGCCGATCTGCAGAAGGCGGTGACCGGCGG
CGTCGCGCATGTGTTCAACAATTCCGGGCAGTCGTGCAACGCGCCGACCCGGATGATCGTGCCGGCCTCGAAGATGAAGG
AGGTCGCCGCGATCGCCAAGGCGGTGGCCGACAAGACCAAGGCCGGCGATCCGCGCGGCGAGGGCACCACGATCGGCCCG
GTGGTCAATCGCGGCCAGTGGGACAAGATCCAGGGCCTGATCCAGAAGGGCGTCGAAGAGGGCGCCACGCTGGTCGCCGG
CGGTCCAGGTCTGCCCGAAGGCGTCAACAAGGGCTTTTATGTGCGCCCGACGATCTTCGCCGACGTCACCGAAGCCATGA
CCATCGCGCGCGAGGAAATTTTTGGGCCGGTGCTGGTGATCATGGGCGCCAAGGATGAAGCCGAGGCGGTGACCATCGCC
AACAACACGCCCTATGGTCTCGCCGGCTACGTTTCGGCCGGCAGCGTCGAGCGGGCGCGCGAAGTCGGCCGAAAAATCCG
CGCCGGCAACGTCAATCTGCAGGGCGTGCCGAACGAACGCACCGCGCCGTTCGGCGGCTACAAGCAATCCGGCAACGGCC
GCGAATGGGGCAAATTCGGCCTCGAGGAATATCTCGAGGTCAAGGCCATCGCCGGCTTCAACGCCGCGTAG

Protein sequence :
MVNRLQFYIDGAWVDPAVTKSTPVVNPATEEAMYEVALGSKADVDKAVAAAKRAFETFSQTSREERVALLEKIIAVYKTR
MKDIGAAVSDEMGAPLPFAEKFQAGAGLGHILSTLEVLKNYAFEEPMGSAMIVREPVGVIGMITPWNWPLNQIACKVAPA
LAAGCTMILKPSEFTPSSALIFAEILHEAGVPKGVFNLINGLGPEVGAAMSEHPDIDMISFTGSTRAGIDVAKRAAPTVK
RVSQELGGKSPNIILEDADLQKAVTGGVAHVFNNSGQSCNAPTRMIVPASKMKEVAAIAKAVADKTKAGDPRGEGTTIGP
VVNRGQWDKIQGLIQKGVEEGATLVAGGPGLPEGVNKGFYVRPTIFADVTEAMTIAREEIFGPVLVIMGAKDEAEAVTIA
NNTPYGLAGYVSAGSVERAREVGRKIRAGNVNLQGVPNERTAPFGGYKQSGNGREWGKFGLEEYLEVKAIAGFNAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-49 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPE_2260 YP_781182.1 aldehyde dehydrogenase VFG0082 Protein 2e-49 42