Gene Information

Name : RPE_2202 (RPE_2202)
Accession : YP_781124.1
Strain : Rhodopseudomonas palustris BisA53
Genome accession: NC_008435
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1125
EC number : -
Position : 2440276 - 2441043 bp
Length : 768 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpd:RPD_2105 ABC transporter related

DNA sequence : 
ATGATCGGCTTCGAGCGTGTGGCGAAAGCATTTGCCGGCGTCAGGGCGGTGGACGGCGTGTCGCTGGCCGTGGCGCGCGG
CGAGTTGCTCGCCATCGTCGGCGGCTCGGGCTCGGGCAAGACCACCTTGCTGCGGCTGGCCAACCGGCTGATCGAACCGG
ACGAAGGCACCATCCGGATCGACGGCGCCGATCTCCGCGATGGCGATGCCGTGCAGCAGCGCCGGCGGATCGGCACCGTG
TTCCAGAGCGGCGCGCTGTTTCCCCATCTTTCCGTCGCCGGCAATATCGGCATCACCCCAAAACTGCTCGGCTGGTCGCG
GCAGGACATCGCCGCGCGGGTCGACGAGTTGCTGGCAATGGTGCGGCTCGACGCGGCCGCCTATCGCGCGCGCCTGCCTC
ATGAACTCTCCGGCGGCCAACGCCAGCGCGTCGCGCTGGCCCGCGCGCTCTGCGCCAAACCCGAGATCGTGTTGATGGAC
GAGCCGTTCGGCGCGCTCGATCCCTTGACGCGCGATGCGCTCGGCGAGGATTTTCGCGCGCTGCATCATCATCTCAGTGT
CACCACAATGATGATCACCCATGATATCACTGAAGCACTGCTCCTCGCCGACCGCGTCGCGGTGATGCGCGAAGGTCGCA
TTCTGGCGCAAGGCACCGCCGCCGAACTGGCGCGGAGCGACGAGGCCTACGTCATCGAGTTGCTGAAGGCGCCGCGCCGT
CAGGCGCGCCGGCTGGCGACGCTGTTGCCGCAGGACGTGCTGGGATGA

Protein sequence : 
MIGFERVAKAFAGVRAVDGVSLAVARGELLAIVGGSGSGKTTLLRLANRLIEPDEGTIRIDGADLRDGDAVQQRRRIGTV
FQSGALFPHLSVAGNIGITPKLLGWSRQDIAARVDELLAMVRLDAAAYRARLPHELSGGQRQRVALARALCAKPEIVLMD
EPFGALDPLTRDALGEDFRALHHHLSVTTMMITHDITEALLLADRVAVMREGRILAQGTAAELARSDEAYVIELLKAPRR
QARRLATLLPQDVLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-42 44
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-42 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPE_2202 YP_781124.1 ABC transporter-like protein NC_008702.1.4606598. Protein 1e-16 44
RPE_2202 YP_781124.1 ABC transporter-like protein BAC0600 Protein 9e-25 43