Gene Information

Name : RPE_1936 (RPE_1936)
Accession : YP_780860.1
Strain : Rhodopseudomonas palustris BisA53
Genome accession: NC_008435
Putative virulence/resistance : Unknown
Product : cobalamin synthesis protein, P47K
Function : -
COG functional category : R : General function prediction only
COG ID : COG0523
EC number : -
Position : 2147668 - 2148903 bp
Length : 1236 bp
Strand : -
Note : PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; KEGG: rpc:RPC_3502 cobalamin synthesis protein, P47K

DNA sequence :
GTGACGAATGATCTAGCTTCCGACTCTCGCCTTCCCGTCACAGTGTTGTCTGGGTTTCTCGGCTCCGGAAAGACCACGCT
GCTGAACCACATCCTCAACAACCGCGACGGACGGCGGGTCGCGGTCATCGTCAACGACATGAGCGAGGTCAACATCGACG
CCGATTTGGTGCGCGAAGAAACCACGCTCAGTCGGTCCGAAGAAAAGCTGGTCGAGCTGACCAACGGCTGCATCTGCTGC
ACGTTGCGGGATGATCTTCTGAAAGAGGTTCGCCGGCTCGCCGACGAAGCGCGCTTCGATTATCTGCTGATCGAAAGCAC
CGGCGTGTCGGAGCCGCTGCCGGTGGCCGCGACCTTCGAATTTCGGCAGGAGAACGGCGAAAGCCTGTCGGATATCTCCC
GTCTCGACGCGATGGTGACGGTGGTCGACGCCGTTCATCTGCTGAAGGACTACTCATCGACCGACTTCCTCGCCGATCGG
GGCGAGACCGCCGGCGAAGAGGATCAACGTACGCTGGTGAACCTGCTGGTCGAGCAGATCGAATTCGCCGACATCATCGT
GATGAACAAGGTATCGGACGCGACGCCAGAACAGCGCGATACTGCCCGCGCCATCATTCATGCGCTCAATCCGGATGCGC
GTCTGATCGAGACCGACTACGGACGCGTCGCTCCGGACGAATTGTTCGATACCGGGCTGTTCGACTTCCAGCGCGCCCAT
CAGCATCCGATGTGGTTCAAGGAGCTCTATGGCTTCGCCGACCATGTCCCGGAGGATGCGGAATACGGTGTGACCAGCTT
TGTCTGGCATGCGCGCCGGCCCCTGATCCCGGAACGCTTCAACGAGTTTCTGCAGACGCCGCTACCGGGTGTGATCCGAG
CCAAGGGACATTTCTGGCTGGCGACGCGTCCCAATTGGGTCGGCGAGTTCAGCCTCGCCGGCGCTTTGGCCACGACGCGT
CCATTGGGGTTCTGGTGGGCCGCGGTGCCGCCGTCCCGCTGGCCGTCCGACGAGACGGCCCGCGCGCAAGTCACAGCCAA
GTTCGACCCGACCTATGGCGACAGGCGACAGGAAATCGTCTTCATCGGCATGCTGGGAACGATGAACCGATCCCGCATCA
CCACCATGCTGGAGAGGTGCTTGATCGAGCCCGCCGAAGGCGAGACGTTCGACCCGAGTGTCCATCGGCTGTTGCCCGAT
CCATTCCCGAGTTGGGGACAGACTAACGCTGCCTGA

Protein sequence :
MTNDLASDSRLPVTVLSGFLGSGKTTLLNHILNNRDGRRVAVIVNDMSEVNIDADLVREETTLSRSEEKLVELTNGCICC
TLRDDLLKEVRRLADEARFDYLLIESTGVSEPLPVAATFEFRQENGESLSDISRLDAMVTVVDAVHLLKDYSSTDFLADR
GETAGEEDQRTLVNLLVEQIEFADIIVMNKVSDATPEQRDTARAIIHALNPDARLIETDYGRVAPDELFDTGLFDFQRAH
QHPMWFKELYGFADHVPEDAEYGVTSFVWHARRPLIPERFNEFLQTPLPGVIRAKGHFWLATRPNWVGEFSLAGALATTR
PLGFWWAAVPPSRWPSDETARAQVTAKFDPTYGDRRQEIVFIGMLGTMNRSRITTMLERCLIEPAEGETFDPSVHRLLPD
PFPSWGQTNAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0408 YP_042534.1 cobalamin synthesis protein Not tested vSa¥á Protein 1e-80 47
SAR0450 YP_039898.1 cobalamin synthesis protein Not tested vSa¥á Protein 9e-81 47