Gene Information

Name : RPE_1865 (RPE_1865)
Accession : YP_780793.1
Strain : Rhodopseudomonas palustris BisA53
Genome accession: NC_008435
Putative virulence/resistance : Resistance
Product : Beta-lactamase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2367
EC number : 3.5.2.6
Position : 2078647 - 2079501 bp
Length : 855 bp
Strand : -
Note : PFAM: beta-lactamase; KEGG: bja:bll0941 beta-lactamase L2 precursor

DNA sequence : 
ATGATGAACCGACGAACATTGCTGGCCACCATTCCAAGCCTCGCCGCATGGTCGGCCTTTGCCGAAGACGCGCCGTCGGC
GCTACAAACCTATGAGCGCGAAAGCGGCGGCCGGATCGGCCTTTACGCCGAAAACCTGGCGACGGGCACGAAGATCGCAT
GGCGAGCGGACGAGCGTCGGGTGATGTGCAGCACTTTCAAGGCCTCGCTCGCTGCCCTCGTTCTGGCTCGCGTCGACCGC
GGAGAAGATAGACTCGACGACATCATCTCGTATTCCGCCGCAGACCTGCTCGACTACGCTCCAGTGGCTAGAGAGAACCT
TGCCAAAGGCGCGATCTCCGTCGACGAGATGTGCAAGGCCATGGTCGAATTCAGCGACAACACCTTCGCCAACCTGTTGC
TGGCCCGCGTCGGGGGACCGGCGGCACTCACCGGCTTCTGGCGCGCGACCGGCGACAGCATCTCCCGGCTCGACCACAAC
GAACCAGAACTGAATTTCCCGCCACCCGGCGATCCCAGCAACTCCACAACGCCGATCGCGATGGCGGGCACCCTACGTCG
TGTCGTGTTGGGCGAGGTGCTGACGCCGGCGTCGCGCGACCGGCTCATCGGTTGGATGGTGAATTGCAAAACCGGCGCCA
ACCGCCTTCGCGCCGGCCTGCCAACAGACTGGAAGATCGCCGACAAGACCGGCAACAACGGCGTGGACGCGGCCGGCGAC
ATCGCGGTTGCTTGGCCGCGAGCCAACGCAGCGGTCGTTATTTGCGCCTACACCCAAGGCGGCACGCCAACCAAGGCACA
ACTTGAAACCGTGTTTGCCGCAATCGGGCGGATGGTCGGCGAGCAGCTGGGCTGA

Protein sequence : 
MMNRRTLLATIPSLAAWSAFAEDAPSALQTYERESGGRIGLYAENLATGTKIAWRADERRVMCSTFKASLAALVLARVDR
GEDRLDDIISYSAADLLDYAPVARENLAKGAISVDEMCKAMVEFSDNTFANLLLARVGGPAALTGFWRATGDSISRLDHN
EPELNFPPPGDPSNSTTPIAMAGTLRRVVLGEVLTPASRDRLIGWMVNCKTGANRLRAGLPTDWKIADKTGNNGVDAAGD
IAVAWPRANAAVVICAYTQGGTPTKAQLETVFAAIGRMVGEQLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
blaTEM-1b AGK07093.1 TEM-1b beta lactamase Not tested SGI1 Protein 1e-39 43
blaTEM AFV53104.1 TEM-1 beta-lactamase Not tested AbGRI2-1 Protein 1e-39 43
ABTW07_3874 YP_005797122.1 beta-lactamase TEM Not tested AbaR4e Protein 2e-39 43
blaTEM-1b ACK44542.1 BlaTEM-1b beta lactamase Not tested SGI1 Protein 1e-39 43
blaTEM-1b ACF06168.1 beta-lactamase TEM-1b Not tested Tn5036-like Protein 1e-39 43
blaTEM-1 ADI24150.1 beta-lactamase TEM-1 Not tested AbaR1 Protein 1e-39 43
blaTEM-1b AGK07035.1 TEM-1b beta lactamase Not tested SGI1 Protein 1e-39 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPE_1865 YP_780793.1 Beta-lactamase AY590467.1.gene1.p1 Protein 2e-40 45
RPE_1865 YP_780793.1 Beta-lactamase AF317502.gene.p01 Protein 9e-41 43
RPE_1865 YP_780793.1 Beta-lactamase Y11069.1.gene1.p01 Protein 4e-41 43
RPE_1865 YP_780793.1 Beta-lactamase HM246246.1.gene1.p1 Protein 9e-41 43
RPE_1865 YP_780793.1 Beta-lactamase AF427128.1.gene1.p01 Protein 2e-40 43
RPE_1865 YP_780793.1 Beta-lactamase AF190695.1.gene1.p01 Protein 5e-40 43
RPE_1865 YP_780793.1 Beta-lactamase JN416112.1.gene1.p01 Protein 3e-41 43
RPE_1865 YP_780793.1 Beta-lactamase AF427129.1.gene1.p01 Protein 1e-40 43
RPE_1865 YP_780793.1 Beta-lactamase DQ105529.2.gene1.p01 Protein 7e-40 43
RPE_1865 YP_780793.1 Beta-lactamase AF190693.1.gene1.p01 Protein 1e-41 43
RPE_1865 YP_780793.1 Beta-lactamase FJ197316.1.gene1.p1 Protein 5e-40 43
RPE_1865 YP_780793.1 Beta-lactamase AF347054.1.gene1.p1 Protein 7e-40 43
RPE_1865 YP_780793.1 Beta-lactamase FJ873740.1.gene1.p01 Protein 4e-41 43
RPE_1865 YP_780793.1 Beta-lactamase X57972.1.gene1.p1 Protein 4e-40 43
RPE_1865 YP_780793.1 Beta-lactamase DQ834728.1.gene1.p1 Protein 7e-41 43
RPE_1865 YP_780793.1 Beta-lactamase AJ239002.1.gene1.p01 Protein 2e-40 43
RPE_1865 YP_780793.1 Beta-lactamase AY628175.1.gene1.p01 Protein 5e-40 43
RPE_1865 YP_780793.1 Beta-lactamase AF516720.1.gene1.p1 Protein 7e-40 43
RPE_1865 YP_780793.1 Beta-lactamase DQ279850.1.gene1.p1 Protein 4e-40 43
RPE_1865 YP_780793.1 Beta-lactamase HQ529916.1.gene1.p01 Protein 5e-40 43
RPE_1865 YP_780793.1 Beta-lactamase AF427130.1.gene1.p01 Protein 6e-40 43
RPE_1865 YP_780793.1 Beta-lactamase AY589493.1.gene1.p01 Protein 3e-40 43
RPE_1865 YP_780793.1 Beta-lactamase AY491682.1.gene1.p1 Protein 2e-40 43
RPE_1865 YP_780793.1 Beta-lactamase AF397067.1.gene1.p1 Protein 5e-40 43
RPE_1865 YP_780793.1 Beta-lactamase U37195.1.gene1.p1 Protein 3e-40 43
RPE_1865 YP_780793.1 Beta-lactamase AF351241.1.gene1.p01 Protein 7e-40 43
RPE_1865 YP_780793.1 Beta-lactamase DQ834729.1.gene1.p1 Protein 4e-41 43
RPE_1865 YP_780793.1 Beta-lactamase Y17584.1.gene1.p01 Protein 2e-40 43
RPE_1865 YP_780793.1 Beta-lactamase AF397066.1.gene1.p1 Protein 4e-40 43
RPE_1865 YP_780793.1 Beta-lactamase AY307100.1.gene1.p1 Protein 5e-40 43
RPE_1865 YP_780793.1 Beta-lactamase AY368236.1.gene1.p1 Protein 7e-40 43
RPE_1865 YP_780793.1 Beta-lactamase AF535127.1.gene1.p01 Protein 2e-40 43
RPE_1865 YP_780793.1 Beta-lactamase AF190692.1.gene1.p01 Protein 4e-40 43
RPE_1865 YP_780793.1 Beta-lactamase EU815939.1.gene1.p1 Protein 5e-40 43
RPE_1865 YP_780793.1 Beta-lactamase FJ405211.1.gene1.p01 Protein 4e-40 43
RPE_1865 YP_780793.1 Beta-lactamase X65254.1.gene1.p01 Protein 6e-40 43
RPE_1865 YP_780793.1 Beta-lactamase AY574271.1.gene1.p01 Protein 5e-40 43
RPE_1865 YP_780793.1 Beta-lactamase AY874537.1.gene1.p01 Protein 3e-40 43
RPE_1865 YP_780793.1 Beta-lactamase EF136377.1.gene1.p01 Protein 5e-40 43
RPE_1865 YP_780793.1 Beta-lactamase AM087453.1.gene1.p01 Protein 4e-42 42
RPE_1865 YP_780793.1 Beta-lactamase DQ322460.1.gene1.p1 Protein 5e-42 42
RPE_1865 YP_780793.1 Beta-lactamase EU418913.1.gene1.p01 Protein 9e-42 42
RPE_1865 YP_780793.1 Beta-lactamase AJ866284.2.gene1.p01 Protein 5e-42 42
RPE_1865 YP_780793.1 Beta-lactamase AJ920369.1.gene1.p01 Protein 3e-42 42
RPE_1865 YP_780793.1 Beta-lactamase AF208796.2.gene1.p01 Protein 4e-42 42
RPE_1865 YP_780793.1 Beta-lactamase JN051143.1.gene1.p01 Protein 2e-42 42
RPE_1865 YP_780793.1 Beta-lactamase HQ661362.1.gene1.p1 Protein 2e-42 42
RPE_1865 YP_780793.1 Beta-lactamase HQ661363.1.gene1.p1 Protein 2e-42 42
RPE_1865 YP_780793.1 Beta-lactamase GU827715.1.gene1.p01 Protein 2e-43 42
RPE_1865 YP_780793.1 Beta-lactamase AF467948.1.gene1.p1 Protein 4e-42 42
RPE_1865 YP_780793.1 Beta-lactamase GQ428198.1.gene1.p01 Protein 2e-42 42
RPE_1865 YP_780793.1 Beta-lactamase JQ029959.1.gene1.p01 Protein 3e-42 42
RPE_1865 YP_780793.1 Beta-lactamase U92041.1.gene1.p01 Protein 3e-42 42
RPE_1865 YP_780793.1 Beta-lactamase AM176551.2.gene1.p01 Protein 3e-42 42
RPE_1865 YP_780793.1 Beta-lactamase HQ637576.1.gene1.p01 Protein 5e-42 42
RPE_1865 YP_780793.1 Beta-lactamase GU932590.1.gene1.p1 Protein 6e-40 42
RPE_1865 YP_780793.1 Beta-lactamase AY628176.1.gene1.p01 Protein 4e-41 42
RPE_1865 YP_780793.1 Beta-lactamase AY005110.1.gene1.p1 Protein 5e-41 42
RPE_1865 YP_780793.1 Beta-lactamase DQ328639.gene.p01 Protein 2e-41 42
RPE_1865 YP_780793.1 Beta-lactamase DQ909059.1.gene1.p1 Protein 3e-40 42
RPE_1865 YP_780793.1 Beta-lactamase GQ140348.1.gene1.p01 Protein 1e-40 42
RPE_1865 YP_780793.1 Beta-lactamase EU729727.1.gene1.p1 Protein 1e-40 42
RPE_1865 YP_780793.1 Beta-lactamase AF395881.gene.p01 Protein 1e-40 42
RPE_1865 YP_780793.1 Beta-lactamase AM176548.2.gene1.p01 Protein 5e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AY210887.1.gene1.p1 Protein 5e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AF301532.1.gene1.p01 Protein 2e-41 41
RPE_1865 YP_780793.1 Beta-lactamase DQ174307.1.gene1.p01 Protein 6e-41 41
RPE_1865 YP_780793.1 Beta-lactamase CP000647.1.gene1607. Protein 3e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AM176547.2.gene1.p01 Protein 1e-41 41
RPE_1865 YP_780793.1 Beta-lactamase AB302939.1.gene1.p01 Protein 4e-42 41
RPE_1865 YP_780793.1 Beta-lactamase EU342351.1.gene1.p01 Protein 4e-42 41
RPE_1865 YP_780793.1 Beta-lactamase EU586041.1.gene1.p01 Protein 5e-42 41
RPE_1865 YP_780793.1 Beta-lactamase X98102.1.gene1.p01 Protein 3e-42 41
RPE_1865 YP_780793.1 Beta-lactamase JX268752.1.gene1.p01 Protein 3e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AY277255.2.gene1.p01 Protein 5e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AM176554.2.gene1.p01 Protein 6e-42 41
RPE_1865 YP_780793.1 Beta-lactamase U20270.1.gene1.p01 Protein 2e-41 41
RPE_1865 YP_780793.1 Beta-lactamase AF535128.1.gene1.p01 Protein 3e-42 41
RPE_1865 YP_780793.1 Beta-lactamase DQ193536.1.gene1.p01 Protein 5e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AM176553.2.gene1.p01 Protein 9e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AB551737.1.gene1.p01 Protein 1e-41 41
RPE_1865 YP_780793.1 Beta-lactamase EU274581.1.gene1.p1 Protein 2e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AY518560.gene.p01 Protein 4e-42 41
RPE_1865 YP_780793.1 Beta-lactamase DQ328802.1.gene1.p01 Protein 6e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AF293345.1.gene1.p01 Protein 9e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AF226622.1.gene1.p01 Protein 2e-41 41
RPE_1865 YP_780793.1 Beta-lactamase DQ836922.1.gene1.p01 Protein 2e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AF148851.1.gene1.p01 Protein 3e-42 41
RPE_1865 YP_780793.1 Beta-lactamase FJ668814.gene1.p01 Protein 3e-42 41
RPE_1865 YP_780793.1 Beta-lactamase DQ174306.1.gene1.p01 Protein 5e-42 41
RPE_1865 YP_780793.1 Beta-lactamase JX268631.1.gene1.p01 Protein 1e-41 41
RPE_1865 YP_780793.1 Beta-lactamase EU155018.1.gene1.p01 Protein 2e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AF164577.1.gene1.p01 Protein 3e-42 41
RPE_1865 YP_780793.1 Beta-lactamase EF373973.1.gene1.p01 Protein 4e-42 41
RPE_1865 YP_780793.1 Beta-lactamase EF373969.1.gene1.p01 Protein 9e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AY661885.1.gene1.p01 Protein 2e-41 41
RPE_1865 YP_780793.1 Beta-lactamase AY289548.1.gene1.p01 Protein 7e-41 41
RPE_1865 YP_780793.1 Beta-lactamase AM176558.2.gene1.p01 Protein 3e-42 41
RPE_1865 YP_780793.1 Beta-lactamase JF812965.1.gene1.p01 Protein 5e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AY259119.1.gene1.p1 Protein 6e-42 41
RPE_1865 YP_780793.1 Beta-lactamase EF373972.1.gene1.p01 Protein 1e-41 41
RPE_1865 YP_780793.1 Beta-lactamase EU684753.1.gene1.p01 Protein 3e-41 41
RPE_1865 YP_780793.1 Beta-lactamase AF299299.1.gene1.p01 Protein 3e-42 41
RPE_1865 YP_780793.1 Beta-lactamase DQ174308.1.gene1.p01 Protein 4e-42 41
RPE_1865 YP_780793.1 Beta-lactamase HM751100.1.gene1.p01 Protein 4e-42 41
RPE_1865 YP_780793.1 Beta-lactamase EU032604.1.gene1.p01 Protein 5e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AJ866285.2.gene1.p01 Protein 2e-41 41
RPE_1865 YP_780793.1 Beta-lactamase AM176549.2.gene1.p01 Protein 3e-42 41
RPE_1865 YP_780793.1 Beta-lactamase EU024485.1.gene1.p01 Protein 3e-42 41
RPE_1865 YP_780793.1 Beta-lactamase DQ013287.1.gene1.p1 Protein 1e-41 41
RPE_1865 YP_780793.1 Beta-lactamase AM176546.2.gene1.p01 Protein 2e-41 41
RPE_1865 YP_780793.1 Beta-lactamase AY790341.1.gene1.p01 Protein 3e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AM176555.2.gene1.p01 Protein 4e-42 41
RPE_1865 YP_780793.1 Beta-lactamase JQ388884.1.gene1.p1 Protein 1e-41 41
RPE_1865 YP_780793.1 Beta-lactamase AY528718.1.gene1.p01 Protein 2e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AM176557.2.gene1.p01 Protein 3e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AY263404.1.gene1.p1 Protein 4e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AF535130.1.gene1.p01 Protein 4e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AB023477.1.gene1.p01 Protein 6e-42 41
RPE_1865 YP_780793.1 Beta-lactamase HQ877615.1.gene1.p01 Protein 9e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AM176552.2.gene1.p01 Protein 2e-42 41
RPE_1865 YP_780793.1 Beta-lactamase FJ194944.1.gene1.p01 Protein 7e-41 41
RPE_1865 YP_780793.1 Beta-lactamase AF148850.1.gene1.p01 Protein 3e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AY079099.1.gene1.p01 Protein 5e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AM176556.2.gene1.p01 Protein 8e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AF547625.1.gene1.p1 Protein 1e-41 41
RPE_1865 YP_780793.1 Beta-lactamase EF373971.1.gene1.p01 Protein 1e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AY223863.1.gene1.p01 Protein 4e-41 41
RPE_1865 YP_780793.1 Beta-lactamase AF467947.1.gene1.p1 Protein 3e-42 41
RPE_1865 YP_780793.1 Beta-lactamase DQ054528.1.gene1.p01 Protein 4e-42 41
RPE_1865 YP_780793.1 Beta-lactamase X55640.1.gene1.p01 Protein 4e-42 41
RPE_1865 YP_780793.1 Beta-lactamase EF373970.1.gene1.p01 Protein 6e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AY070258.1.gene1.p1 Protein 9e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AF535129.1.gene1.p01 Protein 2e-41 41
RPE_1865 YP_780793.1 Beta-lactamase AM176550.2.gene1.p01 Protein 2e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AY288915.1.gene1.p01 Protein 3e-42 41
RPE_1865 YP_780793.1 Beta-lactamase HM559945.1.gene1.p01 Protein 3e-42 41
RPE_1865 YP_780793.1 Beta-lactamase DQ174304.1.gene1.p01 Protein 7e-42 41
RPE_1865 YP_780793.1 Beta-lactamase JX013655.1.gene1.p01 Protein 1e-41 41
RPE_1865 YP_780793.1 Beta-lactamase DQ174305.1.gene1.p01 Protein 2e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AF227204.1.gene1.p01 Protein 4e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AB733453.1.gene1.p01 Protein 5e-41 41
RPE_1865 YP_780793.1 Beta-lactamase AM982522.2.gene1.p01 Protein 7e-42 41
RPE_1865 YP_780793.1 Beta-lactamase DQ663489.gene.p01 Protein 7e-41 41
RPE_1865 YP_780793.1 Beta-lactamase AF174129.3.gene9.p01 Protein 9e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AF325133.1.gene1.p1 Protein 3e-42 41
RPE_1865 YP_780793.1 Beta-lactamase HQ166709.1.gene1.p01 Protein 6e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AY822595.1.gene1.p01 Protein 5e-43 41
RPE_1865 YP_780793.1 Beta-lactamase AJ416345.gene.p01 Protein 9e-42 41
RPE_1865 YP_780793.1 Beta-lactamase FJ214369.1.gene1.p1 Protein 1e-41 41
RPE_1865 YP_780793.1 Beta-lactamase FJ214367.1.gene1.p1 Protein 2e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AY029068.1.gene1.p1 Protein 3e-42 41
RPE_1865 YP_780793.1 Beta-lactamase FJ214366.1.gene1.p1 Protein 3e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AY156923.1.gene1.p01 Protein 1e-42 41
RPE_1865 YP_780793.1 Beta-lactamase HQ833652.1.gene1.p01 Protein 2e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AF252622.2.gene2.p01 Protein 3e-42 41
RPE_1865 YP_780793.1 Beta-lactamase HQ833651.1.gene1.p01 Protein 6e-43 41
RPE_1865 YP_780793.1 Beta-lactamase HM755448.1.gene1.p01 Protein 2e-42 41
RPE_1865 YP_780793.1 Beta-lactamase AY847146.1.gene1.p01 Protein 5e-42 41
RPE_1865 YP_780793.1 Beta-lactamase FJ214368.1.gene1.p1 Protein 6e-42 41
RPE_1865 YP_780793.1 Beta-lactamase HQ398215.1.gene1.p01 Protein 4e-43 41
RPE_1865 YP_780793.1 Beta-lactamase AY143430.1.gene1.p01 Protein 2e-42 41
RPE_1865 YP_780793.1 Beta-lactamase JF274246.1.gene1.p01 Protein 9e-42 41
RPE_1865 YP_780793.1 Beta-lactamase EF581888.1.gene1.p01 Protein 2e-42 41
RPE_1865 YP_780793.1 Beta-lactamase JF274247.1.gene1.p01 Protein 1e-42 41
RPE_1865 YP_780793.1 Beta-lactamase JF274242.1.gene1.p01 Protein 3e-42 41
RPE_1865 YP_780793.1 Beta-lactamase FJ234412.1.gene1.p01 Protein 2e-40 41
RPE_1865 YP_780793.1 Beta-lactamase AF297554.1.gene1.p1 Protein 3e-40 41
RPE_1865 YP_780793.1 Beta-lactamase EU555534.1.gene1.p01 Protein 2e-40 41
RPE_1865 YP_780793.1 Beta-lactamase HQ641421.1.gene1.p01 Protein 2e-40 41