Gene Information

Name : RPE_1857 (RPE_1857)
Accession : YP_780785.1
Strain : Rhodopseudomonas palustris BisA53
Genome accession: NC_008435
Putative virulence/resistance : Resistance
Product : dihydropteroate synthase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0294
EC number : 2.5.1.15
Position : 2069073 - 2069930 bp
Length : 858 bp
Strand : -
Note : KEGG: rpc:RPC_1765 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase, DHPS

DNA sequence :
ATGACCGCGCCGCCGTCCACACCCGCCGCGGCGGCCGCGCCGCCGGATCATCCGCTGCTGCGGACATTGCTCGCGCGGCG
CGTGCCGGTCGTGATGGGCGTGCTCAACATCACCCCCGATTCGTTTTCCGACGGCGGACAGTTTTTGGCGCCGGACCGCG
CCCGCGCCCAGGCCGCAAAGCTGATCGCCGACGGCGCCGACATCATCGACATCGGCGCGGAATCCACCCGGCCCTATGGC
GCCGAGCCGATTTCCGCGGCCGAAGAATTGGCCAGGCTGCGCCCGGTGCTCGCCGACATGGTAGCGCTCGGCACCCCGGT
CTCGATCGACAGCATGAAGGCCGAGGTGGTGGCCTACGCCCTCGACGCCGGCGCTGCGATCGCCAACGACGTCTGGGGAT
TGCAGCGCGATCCGGCGATGGCCGACGTGATCGCCTCGCGCGGCGCACCGGTGATCATGATGCACAACCGCGACGCCGCC
GATCCTGCCATCGACATCATCGCCGACCTCACCGCTTTCTTCGACCGCTCGCTGGCGATCGCCGCCAAGGCTGGTATTCC
CCGCGCGCATATCGTGCTCGATCCCGGCATCGGTTTTGGCAAGACGCCCGAGCAGAGCATGACGGCGCTAGCCCGGCTCG
ACGCGTTGCAACGATTTGCTCTGCCGATCCTGGTCGGCGCCTCGCGCAAGCGTTTCATCAGCACGGTATCGCCGTCGGAG
CCGCAACAGCGGCTCGGCGGTTCGATCGCCGCGCATCTTTTGGCCGCACAGCACGGAGCGCGAATCATCCGCGCCCATGA
CGTCGCGGAAACGGTGCAGGCGCTACGCGTTGCCTGCGCCATCGAGGACAGCCGATGA

Protein sequence :
MTAPPSTPAAAAAPPDHPLLRTLLARRVPVVMGVLNITPDSFSDGGQFLAPDRARAQAAKLIADGADIIDIGAESTRPYG
AEPISAAEELARLRPVLADMVALGTPVSIDSMKAEVVAYALDAGAAIANDVWGLQRDPAMADVIASRGAPVIMMHNRDAA
DPAIDIIADLTAFFDRSLAIAAKAGIPRAHIVLDPGIGFGKTPEQSMTALARLDALQRFALPILVGASRKRFISTVSPSE
PQQRLGGSIAAHLLAAQHGARIIRAHDVAETVQALRVACAIEDSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00253 YP_008211579.1 Dihydropteroate synthase-related enzyme Not tested AbaR26 Protein 8e-28 45
ABK1_0255 YP_005512827.1 Dihydropteroate synthase type-2 Not tested AbaR4d Protein 7e-28 45
BJAB07104_00246 YP_008207711.1 Dihydropteroate synthase-related enzyme Not tested AbaR25 Protein 7e-28 45
sul2 AEZ06044.1 Sul2, sulphonamide-insensitive dihydropteroate synthase Not tested Tn6167 Protein 7e-28 43
sul2 AEA34678.1 dihydropteroate synthase Not tested Not named Protein 5e-28 43
sulI2 AFV47959.1 sulphonamide-insensitive dihydropteroate synthase SulI2 Not tested AbaR25 Protein 5e-28 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPE_1857 YP_780785.1 dihydropteroate synthase AM180355.1.gene1650. Protein 2e-41 46
RPE_1857 YP_780785.1 dihydropteroate synthase CP000675.2.gene3019. Protein 2e-37 45
RPE_1857 YP_780785.1 dihydropteroate synthase CP002695.1.gene1085. Protein 9e-31 44
RPE_1857 YP_780785.1 dihydropteroate synthase CP000647.1.gene3624. Protein 6e-32 44
RPE_1857 YP_780785.1 dihydropteroate synthase DQ464881.1.gene2.p01 Protein 1e-27 43
RPE_1857 YP_780785.1 dihydropteroate synthase NC_002516.2.881715.p Protein 7e-32 43
RPE_1857 YP_780785.1 dihydropteroate synthase CP004022.1.gene3451. Protein 1e-33 43
RPE_1857 YP_780785.1 dihydropteroate synthase CP001138.1.gene3456. Protein 3e-32 43
RPE_1857 YP_780785.1 dihydropteroate synthase NC_002695.1.916103.p Protein 1e-31 42
RPE_1857 YP_780785.1 dihydropteroate synthase CP000034.1.gene3358. Protein 2e-30 42