Gene Information

Name : fixJ (RPE_1726)
Accession : YP_780655.1
Strain : Rhodopseudomonas palustris BisA53
Genome accession: NC_008435
Putative virulence/resistance : Virulence
Product : response regulator FixJ
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 1922691 - 1923308 bp
Length : 618 bp
Strand : -
Note : response regulator for histidine kinase FixL; part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes

DNA sequence : 
ATGCCACGTAGGGGAAGCGTCTACGTCATCGACGACGATCAGGCGATGCGGGATTCGCTCGAGTTCCTGCTCGGCTCGGC
CGACTTCGAGGTCAGGCTGTTCGAATCCGCGATCGACTTTCTTCACGACATGTCCGGCCTGCCGTTCGGCTGCGTCGTCT
CCGACGTGCGGATGCCCGGCATGAACGGCATGGACCTGCTGAAGCAGTTGAAGAACGACCGCGCGCGGCTGCCCGTGGTG
ATCATGACCGGGCATGGCGACGTGCCGCTGGCGGTCGAAGCCATGAAGCTCGGCGCGATCGATTTCATCGAGAAGCCATT
CGAGGACGATCGCCTGATCGACATGATCGAGACCGCGCTGATGCAGGCAAGCGCGGGCGTCAAGACCGAGGCGATCGCCC
AGGACATCGCGGCGCGGATCGCGACGCTTAGTCCGCGCGAGCGCCAGGTGATGGACGGCCTGGTCGCGGGCCTGTCGAAC
AAGGTGATCGCGCGCGAGTTCGATATCAGCCCCCGCACCATCGAAGTCTACCGTGCCAATGTGATGACCAAAATGCAGGC
CGGGAGCCTGTCGGAATTGGTCCGGCTGGCGATGCGCGGCGGCGCGCTCAAGGATTGA

Protein sequence : 
MPRRGSVYVIDDDQAMRDSLEFLLGSADFEVRLFESAIDFLHDMSGLPFGCVVSDVRMPGMNGMDLLKQLKNDRARLPVV
IMTGHGDVPLAVEAMKLGAIDFIEKPFEDDRLIDMIETALMQASAGVKTEAIAQDIAARIATLSPRERQVMDGLVAGLSN
KVIAREFDISPRTIEVYRANVMTKMQAGSLSELVRLAMRGGALKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 2e-26 41
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 2e-26 41
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 2e-26 41
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 1e-26 41
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 2e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fixJ YP_780655.1 response regulator FixJ VFG0488 Protein 5e-27 41