Gene Information

Name : fliQ (RPE_1554)
Accession : YP_780484.1
Strain : Rhodopseudomonas palustris BisA53
Genome accession: NC_008435
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliQ
Function : -
COG functional category : N : Cell motility
COG ID : COG1987
EC number : -
Position : 1747551 - 1747814 bp
Length : 264 bp
Strand : +
Note : FliQ, with proteins FliP and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum

DNA sequence : 
ATGACCGGTATGGAAGTTCTCGACATCGCGCGCGACGCGGTGTGGACCATCGTGCTGGTGTCCGCACCGCTGATGGTGGT
CGGCCTGGTGGTCGGCGTCGCGGTGTCGCTGGTGCAGGCGCTGACCCAGATCCAGGAGCAGACGCTGGTGTTCGTGCCCA
AAATCCTGTCGATCTTCGTCACTTTCGTGCTGGCGCTGCCGTTCATGGCCGATGCCATGCACAGCTATATGATGCGGATT
TCGTCGCGAATCATCGGGGGCTGA

Protein sequence : 
MTGMEVLDIARDAVWTIVLVSAPLMVVGLVVGVAVSLVQALTQIQEQTLVFVPKILSIFVTFVLALPFMADAMHSYMMRI
SSRIIGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaS CAA68200.1 secretion system apparatus, SsaS Virulence SPI-2 Protein 0.005 41
ssaS NP_456108.1 putative type III secretion protein Virulence SPI-2 Protein 0.009 41
ssaS NP_805091.1 type III secretion protein Virulence SPI-2 Protein 0.009 41
ssaS YP_216428.1 secretion system apparatus protein SsaS Virulence SPI-2 Protein 0.007 41
ssaS NP_460385.1 type III secretion system apparatus protein Virulence SPI-2 Protein 0.007 41
hrcS AAB06006.1 HrcS Virulence Hrp PAI Protein 0.56 41
hrcS ABA47280.1 HrcS Virulence S-PAI Protein 3.1 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliQ YP_780484.1 flagellar biosynthesis protein FliQ VFG0520 Protein 0.002 41