|
Name : RPE_1454 (RPE_1454) Accession : YP_780384.1 Strain : Rhodopseudomonas palustris BisA53 Genome accession: NC_008435 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 1625927 - 1626910 bp Length : 984 bp Strand : + Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rpc:RPC_ DNA sequence : ATGACCATCCTGGTCACCGGCGCGGCCGGCTTCATCGGCTTTCACGTCGCCCGCGAACTGGTGAACGCGGGCCAGCGCGT CATCGGCGTCGACAGCCTCAACGATTACTACGACCCGGCCTTGAAACGCGCGCGGCTGGATATGTTGCGCGATCTGCCGG GCTTCGAGTTTTTGCAGGCCGATCTGGCCGATCGCGCCGCCACCGCGGCGCTGTTTGCCAAGCACAAATTTCCGGTGGTG ATCCATCTCGCCGCGCAGGCCGGCGTGCGCTACTCGCTGCAGCATCCGCACGCCTATATCGACGCCAATCTGCAGGGCTT CGCCAATGTGCTGGAGGGCTGCCGCCACAATGGCTGCCGGCATCTCGTCTATGCGTCGTCCTCCTCGGTCTACGGCGCCA ACACCAAGCTGCCGTTTGCGGTGTCGGATCGCACCGATCACCCGATCAGCCTCTATGCCGCGACCAAGAAGGCCAATGAG GTGATGGCCTATTCCTACAGCCATCTCTACAAACTGCCGACCACCGGACTGCGGTTCTTCACCATTTACGGGCCGTGGTA TCGGCCGGACATGGCGCTGTTCCTGTTCGCCAAGGCGATCGTGGCCGGCGAGCCGATCAAGCTGTTCAACCACGGCAAGA TGCGTCGGGACTTTACGTATGTCGACGACGTCACCCGCGTGATCTCGCGACTGATCGATCATGTCCCGGAGGCGGGCGAA ACGCAATTCGGCGTAGCGCCGGCGCGCATCTACAATGTCGGCAATCACCATCCGGAAGAACTGATGCACGTCGTCGGTCT GCTGGAGCAGGAGCTCGGCCGCGTCGCCGCCAAGGAGATGCTGCCGATGCAGCCCGGCGACGTTCCGGCAACGTTCGCCG ATGTCGACGACTTGATTCGGGACGTCGGCTTCAGCCCGTCGACGCCGATCGCCGACGGCCTGCGCGAATTCGCCCGCTGG TATCGGTGCCACTACGGGGTCTGA Protein sequence : MTILVTGAAGFIGFHVARELVNAGQRVIGVDSLNDYYDPALKRARLDMLRDLPGFEFLQADLADRAATAALFAKHKFPVV IHLAAQAGVRYSLQHPHAYIDANLQGFANVLEGCRHNGCRHLVYASSSSVYGANTKLPFAVSDRTDHPISLYAATKKANE VMAYSYSHLYKLPTTGLRFFTIYGPWYRPDMALFLFAKAIVAGEPIKLFNHGKMRRDFTYVDDVTRVISRLIDHVPEAGE TQFGVAPARIYNVGNHHPEELMHVVGLLEQELGRVAAKEMLPMQPGDVPATFADVDDLIRDVGFSPSTPIADGLREFARW YRCHYGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-79 | 53 |
