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Name : fliI (RPE_1146) Accession : YP_780078.1 Strain : Rhodopseudomonas palustris BisA53 Genome accession: NC_008435 Putative virulence/resistance : Virulence Product : flagellum-specific ATP synthase Function : - COG functional category : N : Cell motility COG ID : COG1157 EC number : 3.6.3.14 Position : 1304368 - 1305699 bp Length : 1332 bp Strand : - Note : involved in type III protein export during flagellum assembly DNA sequence : ATGAACGCGCTGGAACGACTCGAGACCACGCTCGCGTCGCTACACAAGGACGTGCCGACGGTGCGGCTGGGCGGCACCGT TTCCGAAGTCGCGCCGACGCATTATCGGGTGGCGGGCTTGTCGCGGCTGGTCAAGCTGGGCGAACTGATCGGGCTCGAAG TCGACAACCAGATGCAGATCGGCGAAGTCATCCGCATCGATGGCAATGGCGTCACCGCCAAGCCGTTCGAGTCCCATGTC GCGGCCGGCCTCGGGCTGATTGCCTATCGCTTGCCGCCCAAAACGCTGTCGCCGCATCCGAGCTGGAAAGGCCGCGTCAT CAACGCGCTCGGCCAGCCGCTCGACGGCGCCGGCGTGTTGCTGGCCGGCGAGCGGGAGATGTCGACCGACGCCAATCCGC CGCCGGCGATGAGCCGTGCGCGGGTGCGCGCGCCGCTGCAGACCGGCGTGCGGGTGATCGACTTGTTCAGCCCGATCTGC GTCGGGCAACGCATCGGCATTTTTGCGGGCTCCGGCGTCGGCAAGACCACCTTGCTGTCGATGATGGCGCAAAGCGCAGG CTTCGACACGGTGGTGACCGCGCTGGTCGGTGAACGCGGCCGCGAGGTCCGGGAATTTTTGGAGGAGGCGCTGGTTCACC ACAAATCCCGCGCGGTGACCGTGGTCTCCACCAGCGACGAGAGCCCGATGATGCGCCGGCTGGCGGCCAAGACCGCCACG ACCATCGCCGAATACTTTCGCGACCGCGGCGAATCGGTGCTGCTGATCGTCGACTCGGTGACGCGCTTTGCCCACGCCGC CCGCGAAGTGGCGCTGGCGACCGGCGAACCCGCGATCGCGCGCGGCTACGCCCCCAGCGTGTTCAGCGAAATCCCGCGCC TGCTGGAGCGCTCCGGCCCCGGAATCGACGGCCAAGGATCGATCACCGGCATCTTCGCCGTGCTGGTCGACGGCGACGAT CACAACGAGCCGGTGGCGGACACCGTGCGCAGCACGCTCGATGGCCACATCGTGCTTGATCGCGAGGTCGCGGATCAGGG GCGCTATCCCGCGGTCAATGTGCTGTCGTCGGTGTCACGCCTGGCGCAACACGTCTGGTCCCCGGAAGAGCGCAATCTGG TGCGCAAACTGCGCGCCATGATCGCCCGGTTCGAGGACACCCGCGATCTGCGTCTGATGGGCGGCTACCAGCCCGGTCGC GACAGCGAGTTGGATCAGGCCGTGCAGCTGGTGCCGAAGATCTACGAAGTGATGCAGCAGGCGCCGTCCGATCCCGGTTG CACCGAACCGTTCCAGGAATTGCTGGCGGTGATCAAGACCGCGATCGGGTGA Protein sequence : MNALERLETTLASLHKDVPTVRLGGTVSEVAPTHYRVAGLSRLVKLGELIGLEVDNQMQIGEVIRIDGNGVTAKPFESHV AAGLGLIAYRLPPKTLSPHPSWKGRVINALGQPLDGAGVLLAGEREMSTDANPPPAMSRARVRAPLQTGVRVIDLFSPIC VGQRIGIFAGSGVGKTTLLSMMAQSAGFDTVVTALVGERGREVREFLEEALVHHKSRAVTVVSTSDESPMMRRLAAKTAT TIAEYFRDRGESVLLIVDSVTRFAHAAREVALATGEPAIARGYAPSVFSEIPRLLERSGPGIDGQGSITGIFAVLVDGDD HNEPVADTVRSTLDGHIVLDREVADQGRYPAVNVLSSVSRLAQHVWSPEERNLVRKLRAMIARFEDTRDLRLMGGYQPGR DSELDQAVQLVPKIYEVMQQAPSDPGCTEPFQELLAVIKTAIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscN | AAO18044.1 | LscN | Virulence | TTSS locus | Protein | 4e-61 | 48 |
| hrcN | AAT96339.1 | HrcN | Virulence | S-PAI | Protein | 7e-55 | 47 |
| hrcN | AAT96299.1 | HrcN | Virulence | S-PAI | Protein | 5e-55 | 47 |
| hrcN | AAT96258.1 | HrcN | Virulence | S-PAI | Protein | 5e-55 | 47 |
| hrcN | ABA47275.1 | HrcN | Virulence | S-PAI | Protein | 8e-58 | 47 |
| ssaN | NP_460380.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 4e-64 | 45 |
| ssaN | NP_456113.1 | putative type III secretion ATP synthase | Virulence | SPI-2 | Protein | 2e-64 | 45 |
| ssaN | NP_805086.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 2e-64 | 45 |
| ssaN | CAA70537.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 3e-64 | 45 |
| ssaN | YP_216423.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 7e-64 | 45 |
| escN | AFO66415.1 | putative LEE-encoded type III secretion system ATPase | Virulence | SESS LEE | Protein | 7e-60 | 45 |
| escN | AFO66300.1 | putative LEE-encoded type III secretion system ATPase | Virulence | SESS LEE | Protein | 7e-60 | 45 |
| hrcN | AAT96141.1 | HrcN | Virulence | T-PAI | Protein | 8e-53 | 45 |
| YPO0267 | YP_002345348.1 | type III secretion system ATPase | Virulence | Not named | Protein | 3e-68 | 44 |
| hrcN | AAG33879.1 | HrcN | Virulence | Hrp PAI | Protein | 4e-52 | 44 |
| hrcN | AAB06001.1 | HrcN | Virulence | Hrp PAI | Protein | 5e-55 | 44 |
| hrcN | NP_791227.1 | type III secretion cytoplasmic ATPase HrcN | Virulence | Hrp PAI | Protein | 8e-52 | 44 |
| invC | YP_217813.1 | ATP synthase SpaL | Virulence | SPI-1 | Protein | 8e-56 | 44 |
| spaI | NP_457288.1 | secretory apparatus ATP synthase (associated with virulence) | Virulence | SPI-1 | Protein | 8e-56 | 44 |
| spaI | NP_806497.1 | ATP synthase SpaL | Virulence | SPI-1 | Protein | 8e-56 | 44 |
| invC | NP_461815.1 | ATP synthase SpaL | Virulence | SPI-1 | Protein | 8e-56 | 44 |
| hrcN | AAT96195.1 | HrcN | Virulence | T-PAI | Protein | 1e-52 | 44 |
| hrcN | ABQ88354.1 | HrcN | Virulence | Hrp PAI | Protein | 2e-49 | 43 |
| hrpJ4 | AAA81942.1 | HrpJ4 | Virulence | Hrp PAI | Protein | 2e-49 | 43 |
| escN | AAC38383.1 | EscN | Virulence | LEE | Protein | 1e-60 | 41 |
| invC | AAS66861.1 | InvC | Not tested | SSR-2 | Protein | 6e-52 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliI | YP_780078.1 | flagellum-specific ATP synthase | VFG0048 | Protein | 3e-68 | 48 |
| fliI | YP_780078.1 | flagellum-specific ATP synthase | VFG2144 | Protein | 1e-64 | 47 |
| fliI | YP_780078.1 | flagellum-specific ATP synthase | VFG0192 | Protein | 6e-62 | 47 |
| fliI | YP_780078.1 | flagellum-specific ATP synthase | VFG0515 | Protein | 2e-64 | 45 |
| fliI | YP_780078.1 | flagellum-specific ATP synthase | VFG0555 | Protein | 3e-56 | 44 |
| fliI | YP_780078.1 | flagellum-specific ATP synthase | VFG1008 | Protein | 4e-51 | 43 |
| fliI | YP_780078.1 | flagellum-specific ATP synthase | VFG2331 | Protein | 3e-65 | 42 |
| fliI | YP_780078.1 | flagellum-specific ATP synthase | VFG1254 | Protein | 7e-65 | 42 |
| fliI | YP_780078.1 | flagellum-specific ATP synthase | VFG1778 | Protein | 1e-52 | 42 |
| fliI | YP_780078.1 | flagellum-specific ATP synthase | VFG0730 | Protein | 6e-61 | 41 |
