Gene Information

Name : RPE_1027 (RPE_1027)
Accession : YP_779962.1
Strain : Rhodopseudomonas palustris BisA53
Genome accession: NC_008435
Putative virulence/resistance : Virulence
Product : phage transcriptional regulator, AlpA
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 1163665 - 1163880 bp
Length : 216 bp
Strand : +
Note : PFAM: Prophage CP4-57 regulatory; KEGG: rpc:RPC_4521 phage transcriptional regulator, AlpA

DNA sequence :
ATGCCCGAACCAGACCGTATCATCCGTATGAAAACCGTTCTCGCCCGCAGCGGCCTGTCCAGGTCCACCATCTACCGCAA
GATCGCCGAGGGGACATTCCCGGCCCAGATCAGGATCAGCGTCAACGGCGCAGGCTGGCATGAATCCGAAATCAACCGCT
GGATCGACAACCCAGTCGCGTGGCGGCCACGGAGCGAGTTCGATGATCCTAGCTGA

Protein sequence :
MPEPDRIIRMKTVLARSGLSRSTIYRKIAEGTFPAQIRISVNGAGWHESEINRWIDNPVAWRPRSEFDDPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 3e-09 42
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 3e-09 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPE_1027 YP_779962.1 phage transcriptional regulator, AlpA VFG1141 Protein 7e-10 42