Gene Information

Name : Bamb_6205 (Bamb_6205)
Accession : YP_778083.1
Strain :
Genome accession: NC_008392
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 776277 - 777059 bp
Length : 783 bp
Strand : -
Note : PFAM: Integrase, catalytic region; KEGG: rso:RSc3089 ISRSO11-transposase orfB protein

DNA sequence :
TTGGCGCGTAGCACGTTCTATTACCAGCTTGGGACGCTGAGCGTCGACGATCGCCGTGCCGATCTCAAGGCGAAGATCCG
GGCGGTGTTCGACCATCACAAGGGCCGCTACGGCTATCGACGCGTCACGGCTGCGATTCGGCAAACCGGGCATCTCGTCA
ACCACAAGGCCGTGCAGAGGCTGATGCAGCAATTGCAGTTGAAATCCCTGCTGCGCCCGAAGAAATACCGCTCCTGGCGA
GGCGAAGTCGGCAAAGCCGCACCCAACCTGCTGCAACGTCAGTTTAGTGCCGCACAGGCCAATCAGAAGTGGGTGACGGA
TGTGACGGAATTCAACGTCGGCGGTCAGAAGCTGTACCTGTCGCCGGTGATGGATCTGTACAACGGCGAGATCGTGGCTT
ACCAGATGGATCGACGCCCAAGCTTCGAGTTGGTCAGCGGCATGCTCAAGAAGGCGCTGACCAAACTCAAACGCACGGAC
AGACCGCTATTGCATTCGGACCAAGGCTGGCAATACCGAATGCCGGCGTTTCGCCGGCAACTGAAGCGGCGCAAACTGAC
TCAAAGCATGTCCCGCAAGGGGAACTGCCTCGATAATGCTGCGATGGAAAGCTTCTTCGGCACGCTCAAGTCCGAGTGCT
ACAAGGGACATCGCTTCACTTGCGTGGAGCATTTGCGCGACACGCTCAATCACTACATCCACTACTACAACCACGAACGC
ATCAAGCTCAAATTGAAAGGGCTGAGTCCCGTGCAATACAGAACTCAGCCCTTGAGCGCCTAG

Protein sequence :
MARSTFYYQLGTLSVDDRRADLKAKIRAVFDHHKGRYGYRRVTAAIRQTGHLVNHKAVQRLMQQLQLKSLLRPKKYRSWR
GEVGKAAPNLLQRQFSAAQANQKWVTDVTEFNVGGQKLYLSPVMDLYNGEIVAYQMDRRPSFELVSGMLKKALTKLKRTD
RPLLHSDQGWQYRMPAFRRQLKRRKLTQSMSRKGNCLDNAAMESFFGTLKSECYKGHRFTCVEHLRDTLNHYIHYYNHER
IKLKLKGLSPVQYRTQPLSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1088 YP_853108.1 transposase subunit Not tested PAI IV APEC-O1 Protein 1e-74 55
SEQ_1760 YP_002746996.1 transposase Not tested ¥ÕSeq3 Protein 2e-56 49
SEQ_0791 YP_002746129.1 transposase Not tested ¥ÕSeq2 Protein 2e-56 49
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 3e-64 49
CDBH8_0905 YP_005159997.1 transposase-like protein Not tested Not named Protein 4e-48 45
CDCE8392_1982 YP_005134513.1 transposase-like protein Not tested Not named Protein 1e-48 45