|
Name : Bamb_5857 (Bamb_5857) Accession : YP_777737.1 Strain : Genome accession: NC_008392 Putative virulence/resistance : Virulence Product : type III secretion system protein HrcU Function : - COG functional category : N : Cell motility COG ID : COG1377 EC number : - Position : 333337 - 334395 bp Length : 1059 bp Strand : + Note : PFAM: type III secretion exporter; KEGG: sctU; type III secretion inner membrane protein DNA sequence : ATGAGCGACGAGAAAACCGAAGAGCCCACAGACAAGAAGCTGGACAAAGTCCGCGAGGAAGGTCAGGTCGCGAAGAGTTC CGACCTCGTCGAAGTCGCGTCGCTGGGCTCGATCGTGCTCGTGCTGACGGCGGGCCAGCACTACCTTGCCGATACGCTGC GCGCGGTCGTCAAGGAGGCGATCGATTTCACGCACGGCCCGCGCGAGTTGCAGGACCTCTCGGTCGCGCTCGTTCATATG GGCGTGCAGGCGCTCGGCCTGCTGTGCGGGATCGCGGCCGTCGCGCTCGTCGCGGCCTTCCTCGCGCTTGCCCCGCAAAC GGGGCTCAAGATCTCGCTGAAAGCCGTCATGCCGAAGCTCGCGTCGGTCAGCCCCGGGTCCGGCTTTCAGCGGATCTTCT CGATGAACTCGGCCATCGATCTCGTCAAGATGGTCGTCAAGGCCGCGATTCTCGTCGCCGTCATGTGGCAGACGATCAAA AGCGCGATGCCCGTCGTCGCGAGCGCGCTCGACCGGTCGGTACCCCAGTTGATCGCCGTGCTGTGGTCCGTGCTCATGCA TGTCGTCGTCGTCGCGCTCGGCGTGTTCATCGCCATCGGCGCATTCGACTACAAGCTGCAGAAGTGGCTCTTCATCCGCA AGAACCGGATGTCGAAAGACGAGGTGAAGCGCGAGCACAAGGAAAGCGACGGCAACCCGGAAGTCAAGGGCGAACGCAAG CGCATGGCCAGGGAAATGTCGCAGGAAGGCCCGAAAGGCGGCGTATCGCGCGCGAACGTCGTGGTCGTCAACCCGGTTCA CTACGCGGTCGCGCTGCGCTACGACCCGACGGAGTTTCCGCTGCCCGTCGTGCTCGCCAAGGGCGTCGACGAACAGGCGC TGCGGCTGCGCCAGCAGGCGATGCACGCGCGCGTGCCCATCGTCGCGAACCCGCCCGTCGCGCGGATGCTGCACAAGGTA CCGCTCAATCAGCCGATTCCCGAAGAACTGTTCGAAGTCGTCGCCGCGATTCTTCGCTGGGTGGACGGCCTCGCGCCTCA AACCGCCATCACGGAGTAG Protein sequence : MSDEKTEEPTDKKLDKVREEGQVAKSSDLVEVASLGSIVLVLTAGQHYLADTLRAVVKEAIDFTHGPRELQDLSVALVHM GVQALGLLCGIAAVALVAAFLALAPQTGLKISLKAVMPKLASVSPGSGFQRIFSMNSAIDLVKMVVKAAILVAVMWQTIK SAMPVVASALDRSVPQLIAVLWSVLMHVVVVALGVFIAIGAFDYKLQKWLFIRKNRMSKDEVKREHKESDGNPEVKGERK RMAREMSQEGPKGGVSRANVVVVNPVHYAVALRYDPTEFPLPVVLAKGVDEQALRLRQQAMHARVPIVANPPVARMLHKV PLNQPIPEELFEVVAAILRWVDGLAPQTAITE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcU | BAB07858.1 | HrcU | Virulence | Hrp PAI | Protein | 3e-59 | 46 |
| XC_3012 | YP_244080.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 2e-56 | 45 |
| hrcU | NP_636604.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 2e-56 | 45 |
| hrcU | YP_198724.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 1e-58 | 45 |
| hrcU | AAP34345.1 | HrcU | Virulence | Hrp PAI | Protein | 1e-58 | 44 |
| hrcU | YP_362157.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 9e-57 | 44 |
| hrcU | NP_640761.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 1e-57 | 44 |
