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Name : Bamb_5849 (Bamb_5849) Accession : YP_777729.1 Strain : Genome accession: NC_008392 Putative virulence/resistance : Virulence Product : type III secretion protein SpaR/YscT/HrcT Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4791 EC number : - Position : 326361 - 327167 bp Length : 807 bp Strand : - Note : TIGRFAM: type III secretion protein SpaR/YscT/HrcT; PFAM: type III secretion system inner membrane R protein; KEGG: bte:BTH_II0742 type III secretion inner membrane protein SctT DNA sequence : ATGAGCGAGATCACCTTTGCATCGATCGAATCGAGCCACCAACTGGTCAGGTTTCTGATCGTGCTCGGCCTTTGCAGCGA GCGATTGATGGTGCTGATGATGATCTTTCCGCCCACGTCCGACAACGTCGTGCAGGGCCGCGTGCGCACCGCGCTCGCGC TGCTGTGGGGCAGCTTCGTCGCATACGGGCAGCGCGGCCTGCTCGAGCAGGGGGATGCGACGATACTCGTCGGTATCGGC CTGAAGGAGGCGCTGATCGGCGTCGGGCTCGGCTTCGCGGCATCGACGGTGTTCTGGGCCGCGGAAAGCGTCGGCACGTA CGTCGACGATCTGACCGGCTTCAATCAACTGCAGATGCAGAACCCGAGCCAGGGGCAGCAGACGTCGCTGACGTCGACGC TCCTGAGCCAGTTCGCGATTGCGGCGTTCTGGTGTCTCGGCGGCATGACGTTTCTGCTCGGCGCGATTTACGAGTCGTAC ACCTGGTGGCCGCTCGGCAGCCTCGCGCCCGCGGGCGGCTCGGTACTCGAATCGTTCGTGCTTTTGAAGACCGATTCGCT GATGGAAACGGTGGCGAAGCTGGCAACGCCGATGATGCTGATGCTGCTGTTGATCGACATCGGCTTCGGCTTTACGGGAA AGGTATCGCAAAAGCTCGATCTGCCGTCGCTCGCGCAGCCCGTGAAAGGCGCGCTCACGATTCTGATGCTTGCGCTGCTG GCGGCCATCTTCATCGATCAGGTGCGCGATCAGCTTTCGCTCGTGGGCGTGGCCGCCGAGGCACGGGCGATCGCGGGCGG CAGATAA Protein sequence : MSEITFASIESSHQLVRFLIVLGLCSERLMVLMMIFPPTSDNVVQGRVRTALALLWGSFVAYGQRGLLEQGDATILVGIG LKEALIGVGLGFAASTVFWAAESVGTYVDDLTGFNQLQMQNPSQGQQTSLTSTLLSQFAIAAFWCLGGMTFLLGAIYESY TWWPLGSLAPAGGSVLESFVLLKTDSLMETVAKLATPMMLMLLLIDIGFGFTGKVSQKLDLPSLAQPVKGALTILMLALL AAIFIDQVRDQLSLVGVAAEARAIAGGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpB8 | AAB08463.1 | HrpB8 | Virulence | Hrp PAI | Protein | 8e-40 | 46 |
| hrpB8 | YP_198732.1 | protein HrpB8 | Virulence | Hrp PAI | Protein | 4e-39 | 46 |
| hrcT | NP_640769.1 | HrcT protein | Virulence | Hrp PAI | Protein | 1e-39 | 46 |
| XC_3004 | YP_244072.1 | HrpB8 protein | Virulence | Hrp PAI | Protein | 1e-39 | 46 |
| hrcT | NP_636612.1 | HrpB8 protein | Virulence | Hrp PAI | Protein | 1e-39 | 46 |
| hrcT | YP_362165.1 | HrcT protein | Virulence | Hrp PAI | Protein | 1e-39 | 46 |
| hrpB8 | BAB07850.1 | HrpB8 | Virulence | Hrp PAI | Protein | 3e-39 | 46 |
| hrpB8 | AAF61279.1 | HrpB8 | Virulence | Hrp PAI | Protein | 3e-39 | 46 |
| hrcT | AAP34337.1 | HrcT | Virulence | Hrp PAI | Protein | 9e-40 | 46 |
