Gene Information

Name : Bamb_4023 (Bamb_4023)
Accession : YP_775910.1
Strain :
Genome accession: NC_008391
Putative virulence/resistance : Virulence
Product : pili assembly chaperone
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 940562 - 941302 bp
Length : 741 bp
Strand : +
Note : PFAM: pili assembly chaperone; KEGG: reu:Reut_A0839 pili assembly chaperone:bacterial pili assembly chaperone

DNA sequence : 
ATGAAACTGTTGAAGCTCTTCCGTACGTTGACCCTCGCGGTCACAGCGTTCGCGTCGCAGGCCGACGCGAGCGTCGTGAT
CGCCGGCACACGCGTGATCTTCCCGTCCACGGAGCGCGAAGTCACGATCCAGCTCACGAACGACAGCAAGCGTCCGGCAC
TGGTGCAGGCATGGCTCGACGACGGCGACAGCCGCGCGTTGCCGGAGAACATCGACGTGCCGTTCACGCTCACGCCGTCG
ATGTTCCGGATGGAAGCCGGCAACGGGCAGACGCTGCGCCTCGTGCATACCGGCGAACCGCTGCCTGCCGATCGGGAATC
GCTGTTCTGGCTGAACGTGCTCGAAGTGCCGCCGAAGGCCGCCGCGACCGAGAACCGCAACCGCATCCAGCTGGCGTTCC
GCTCACGCATCAAGCTCATGTACCGCCCCGCCGGGTTGGCCGGCAACGCGGACGACGCCCCGATGCAAGTCGACTGGCGC
GTGGTTCGCGGCGACGGCGGCTATGCACTCGAGGCCCGCAATCCGACACCGTACGTCGTCAATTTCGGCAACGTGCAACT
GAAGTCCGGCGGCCGCAAGCACGACGCCGGCATGGGCTACGTGCTGCCCCGAAGCACGCAGCGGTTCCCGATCAAGGATC
TCGCCGGCGCACCCGCCGCGGGATCAACCGTCGAGTTCGGCAGCATCAACGACTGGGGCCGGGCAACCGACATCGAACGT
CCGGTCGGCGTCGAACCGTAA

Protein sequence : 
MKLLKLFRTLTLAVTAFASQADASVVIAGTRVIFPSTEREVTIQLTNDSKRPALVQAWLDDGDSRALPENIDVPFTLTPS
MFRMEAGNGQTLRLVHTGEPLPADRESLFWLNVLEVPPKAAATENRNRIQLAFRSRIKLMYRPAGLAGNADDAPMQVDWR
VVRGDGGYALEARNPTPYVVNFGNVQLKSGGRKHDAGMGYVLPRSTQRFPIKDLAGAPAAGSTVEFGSINDWGRATDIER
PVGVEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33727.1 putative F17-like fimbrial chaperone Virulence PAI I 536 Protein 1e-37 46
ecpD1 AAO49832.1 pilin chaperone ecpD1 Not tested SPI-3 Protein 1e-42 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bamb_4023 YP_775910.1 pili assembly chaperone VFG1468 Protein 6e-38 46
Bamb_4023 YP_775910.1 pili assembly chaperone VFG1145 Protein 3e-28 42
Bamb_4023 YP_775910.1 pili assembly chaperone VFG0007 Protein 2e-35 41