Gene Information

Name : Bamb_5325 (Bamb_5325)
Accession : YP_777206.1
Strain :
Genome accession: NC_008391
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2366688 - 2367353 bp
Length : 666 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bur:Bcep18194_B2526 two component transcriptional regulator, winged helix family

DNA sequence : 
ATGCGCATTCTCGTCGTGGAGGACGATGCCGAAATCGGCGCGGCGATCCGCAGCCGCCTCACGCGGCTCGGCCATGCCGT
CGATCTCGAAACCGACGGCTCGACCGCGAACAGCCTGCTGCGCGTCGAGCGCTTCGACCTCGTCGTGCTCGATGCGAACC
TGCCCGGACTCGACGGCTTCACGGTGCTGCGCAACCTGCGCGCGTCGGGCAGCACGACGCCGGTGCTGCTCGTCACCGCG
CGCTCGGCGATCGACGATCGCGTGAGCGGCCTCGGCTTCGGCGCCGACGACTATCTCGTGAAGCCGTTCGACTACCGCGA
GCTCGAAGCGCGCGTGCAGGCGCTGCTGCGCCGCAACAGCGGTCACGCGAACGACGTGCTGACGCTCGGCGGCCTCGTGA
TCGACCGCAGCAGCCGCCTCGCGGAACTCGACGGTCAGCCGCTGTCGCTGTCGCGCCAGGAGTTCGCGTTGCTCGAGATT
CTCGCGAGCCGTCCGCAGCGGATCTTCTCGAAGGACGAACTGCTGAACCAGCTGTTCAGCTTCGGCAACGAGCCGAGCGC
GAACGCGGTCGAGCAATACGTGACGCGCGTGCGCAGGAAGCTGCAAGGCAGCTCGGTCGAGATCCGCACCGCGCGCGGGA
TGGGGTATCAGATTGCCGCGCATTGA

Protein sequence : 
MRILVVEDDAEIGAAIRSRLTRLGHAVDLETDGSTANSLLRVERFDLVVLDANLPGLDGFTVLRNLRASGSTTPVLLVTA
RSAIDDRVSGLGFGADDYLVKPFDYRELEARVQALLRRNSGHANDVLTLGGLVIDRSSRLAELDGQPLSLSRQEFALLEI
LASRPQRIFSKDELLNQLFSFGNEPSANAVEQYVTRVRRKLQGSSVEIRTARGMGYQIAAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-33 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bamb_5325 YP_777206.1 two component transcriptional regulator NC_002516.2.879194.p Protein 2e-36 42
Bamb_5325 YP_777206.1 two component transcriptional regulator BAC0638 Protein 2e-28 42
Bamb_5325 YP_777206.1 two component transcriptional regulator BAC0083 Protein 5e-33 41
Bamb_5325 YP_777206.1 two component transcriptional regulator BAC0197 Protein 2e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bamb_5325 YP_777206.1 two component transcriptional regulator VFG1390 Protein 3e-35 41
Bamb_5325 YP_777206.1 two component transcriptional regulator VFG1389 Protein 2e-29 41